Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.6□□□□□ -1.51
GPC4O75487 AC040174.2-201ENST00000602701 465 ntBASIC5.6□□□□□ -1.51
GPC4O75487 RPL21P136-201ENST00000605378 396 ntBASIC5.6□□□□□ -1.51
GPC4O75487 AC015722.2-201ENST00000622210 551 ntBASIC5.6□□□□□ -1.51
GPC4O75487 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
GPC4O75487 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.6□□□□□ -1.51
GPC4O75487 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.6□□□□□ -1.51
GPC4O75487 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.6□□□□□ -1.51
GPC4O75487 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.6□□□□□ -1.51
GPC4O75487 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
GPC4O75487 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
GPC4O75487 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
GPC4O75487 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.6□□□□□ -1.51
GPC4O75487 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
GPC4O75487 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
GPC4O75487 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
GPC4O75487 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
GPC4O75487 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.6□□□□□ -1.51
GPC4O75487 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
GPC4O75487 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
GPC4O75487 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.59□□□□□ -1.51
GPC4O75487 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.59□□□□□ -1.51
GPC4O75487 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
GPC4O75487 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
GPC4O75487 OR13C1P-202ENST00000641378 2919 ntBASIC5.59□□□□□ -1.51
GPC4O75487 AC104964.3-201ENST00000606115 2860 ntBASIC5.59□□□□□ -1.51
GPC4O75487 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
GPC4O75487 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
GPC4O75487 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.59□□□□□ -1.51
GPC4O75487 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.59□□□□□ -1.51
GPC4O75487 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
GPC4O75487 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
GPC4O75487 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
GPC4O75487 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.59□□□□□ -1.51
GPC4O75487 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
GPC4O75487 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.59□□□□□ -1.51
GPC4O75487 SNORA64.1-201ENST00000362600 132 ntBASIC5.59□□□□□ -1.51
GPC4O75487 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
GPC4O75487 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
GPC4O75487 SNORA70.6-201ENST00000383934 134 ntBASIC5.59□□□□□ -1.51
GPC4O75487 SNORA40.4-201ENST00000390971 128 ntBASIC5.59□□□□□ -1.51
GPC4O75487 CCNB2P1-201ENST00000399411 1150 ntBASIC5.59□□□□□ -1.51
GPC4O75487 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
GPC4O75487 MIR1282-201ENST00000408865 101 ntBASIC5.59□□□□□ -1.51
GPC4O75487 RPS3P2-201ENST00000421346 701 ntBASIC5.59□□□□□ -1.51
GPC4O75487 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC5.59□□□□□ -1.51
GPC4O75487 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.59□□□□□ -1.51
GPC4O75487 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.59□□□□□ -1.51
GPC4O75487 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.59□□□□□ -1.51
GPC4O75487 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.59□□□□□ -1.51
GPC4O75487 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
GPC4O75487 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.59□□□□□ -1.51
GPC4O75487 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.59□□□□□ -1.51
GPC4O75487 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC5.59□□□□□ -1.51
GPC4O75487 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.59□□□□□ -1.51
GPC4O75487 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
GPC4O75487 UBFD1P1-201ENST00000473259 814 ntBASIC5.59□□□□□ -1.51
GPC4O75487 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.59□□□□□ -1.51
GPC4O75487 RWDD4P1-201ENST00000488019 565 ntBASIC5.59□□□□□ -1.51
GPC4O75487 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.59□□□□□ -1.51
GPC4O75487 IGKV2-4-201ENST00000523070 340 ntBASIC5.59□□□□□ -1.51
GPC4O75487 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.59□□□□□ -1.51
GPC4O75487 AC139697.1-201ENST00000548429 745 ntBASIC5.59□□□□□ -1.51
GPC4O75487 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.59□□□□□ -1.51
GPC4O75487 AC079600.1-201ENST00000550326 297 ntBASIC5.59□□□□□ -1.51
GPC4O75487 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
GPC4O75487 HSPE1P2-201ENST00000554777 306 ntBASIC5.59□□□□□ -1.51
GPC4O75487 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.59□□□□□ -1.51
GPC4O75487 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC5.59□□□□□ -1.51
GPC4O75487 AGGF1P7-201ENST00000562369 913 ntBASIC5.59□□□□□ -1.51
GPC4O75487 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.59□□□□□ -1.51
GPC4O75487 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.59□□□□□ -1.51
GPC4O75487 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.59□□□□□ -1.51
GPC4O75487 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
GPC4O75487 AC090607.5-201ENST00000615692 224 ntBASIC5.59□□□□□ -1.51
GPC4O75487 MIR6133-201ENST00000617057 108 ntBASIC5.59□□□□□ -1.51
GPC4O75487 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.59□□□□□ -1.51
GPC4O75487 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
GPC4O75487 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.59□□□□□ -1.51
GPC4O75487 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.59□□□□□ -1.51
GPC4O75487 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.52
GPC4O75487 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
GPC4O75487 AC024341.1-201ENST00000526444 1552 ntBASIC5.59□□□□□ -1.52
GPC4O75487 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.59□□□□□ -1.52
GPC4O75487 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
GPC4O75487 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
GPC4O75487 DDX6P1-205ENST00000441966 1436 ntBASIC5.58□□□□□ -1.52
GPC4O75487 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.58□□□□□ -1.52
GPC4O75487 AC026523.2-201ENST00000625039 7739 ntBASIC5.58□□□□□ -1.52
GPC4O75487 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
GPC4O75487 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
GPC4O75487 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.58□□□□□ -1.52
GPC4O75487 AC007938.2-201ENST00000604666 2634 ntBASIC5.58□□□□□ -1.52
GPC4O75487 RNA5SP394-201ENST00000364216 119 ntBASIC5.58□□□□□ -1.52
GPC4O75487 RN7SKP292-201ENST00000365522 317 ntBASIC5.58□□□□□ -1.52
GPC4O75487 RNA5SP30-201ENST00000365552 115 ntBASIC5.58□□□□□ -1.52
GPC4O75487 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
GPC4O75487 HMGB1P20-201ENST00000402555 677 ntBASIC5.58□□□□□ -1.52
GPC4O75487 UBE2V1P15-201ENST00000407776 448 ntBASIC5.58□□□□□ -1.52
GPC4O75487 AL357078.2-201ENST00000416486 427 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms