Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AL596266.1-201ENST00000448132 400 ntBASIC5.66□□□□□ -1.5
SMAD6O43541 RN7SL547P-201ENST00000490793 290 ntBASIC5.66□□□□□ -1.5
SMAD6O43541 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SMAD6O43541 AC098862.1-201ENST00000504991 413 ntBASIC5.66□□□□□ -1.5
SMAD6O43541 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.66□□□□□ -1.5
SMAD6O43541 RFPL4AP3-201ENST00000515267 345 ntBASIC5.66□□□□□ -1.5
SMAD6O43541 RN7SKP253-201ENST00000516424 309 ntBASIC5.66□□□□□ -1.5
SMAD6O43541 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.66□□□□□ -1.5
SMAD6O43541 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.66□□□□□ -1.5
SMAD6O43541 IGKV2-18-201ENST00000522607 343 ntBASIC5.66□□□□□ -1.5
SMAD6O43541 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.66□□□□□ -1.5
SMAD6O43541 AC060780.2-201ENST00000589047 198 ntBASIC5.66□□□□□ -1.5
SMAD6O43541 AC012616.1-201ENST00000600294 197 ntBASIC5.66□□□□□ -1.5
SMAD6O43541 AC138473.1-201ENST00000605717 526 ntBASIC5.66□□□□□ -1.5
SMAD6O43541 AP000864.1-201ENST00000609424 650 ntBASIC5.66□□□□□ -1.5
SMAD6O43541 AC084824.5-201ENST00000612009 413 ntBASIC5.66□□□□□ -1.5
SMAD6O43541 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.66□□□□□ -1.5
SMAD6O43541 AL118522.2-201ENST00000616045 615 ntBASIC5.66□□□□□ -1.5
SMAD6O43541 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.66□□□□□ -1.5
SMAD6O43541 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC5.66□□□□□ -1.5
SMAD6O43541 AL356490.1-201ENST00000623079 479 ntBASIC5.66□□□□□ -1.5
SMAD6O43541 AC009039.2-201ENST00000624524 529 ntBASIC5.66□□□□□ -1.5
SMAD6O43541 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.66□□□□□ -1.5
SMAD6O43541 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.66□□□□□ -1.5
SMAD6O43541 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC5.66□□□□□ -1.5
SMAD6O43541 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.66□□□□□ -1.5
SMAD6O43541 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.66□□□□□ -1.5
SMAD6O43541 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SMAD6O43541 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SMAD6O43541 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
SMAD6O43541 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SMAD6O43541 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.66□□□□□ -1.5
SMAD6O43541 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.66□□□□□ -1.5
SMAD6O43541 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SMAD6O43541 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.66□□□□□ -1.5
SMAD6O43541 CASC19-248ENST00000641674 1356 ntBASIC5.66□□□□□ -1.5
SMAD6O43541 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
SMAD6O43541 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SMAD6O43541 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SMAD6O43541 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.65□□□□□ -1.5
SMAD6O43541 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
SMAD6O43541 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SMAD6O43541 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.65□□□□□ -1.5
SMAD6O43541 AC239868.2-201ENST00000564237 4527 ntBASIC5.65□□□□□ -1.5
SMAD6O43541 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
SMAD6O43541 AC068446.1-201ENST00000556425 1549 ntBASIC5.65□□□□□ -1.5
SMAD6O43541 AL034546.1-201ENST00000623740 3693 ntBASIC5.65□□□□□ -1.5
SMAD6O43541 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
SMAD6O43541 AC006484.1-201ENST00000435086 1884 ntBASIC5.65□□□□□ -1.5
SMAD6O43541 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SMAD6O43541 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
SMAD6O43541 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SMAD6O43541 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC5.65□□□□□ -1.5
SMAD6O43541 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
SMAD6O43541 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.65□□□□□ -1.5
SMAD6O43541 RN7SKP162-201ENST00000363605 345 ntBASIC5.65□□□□□ -1.5
SMAD6O43541 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SMAD6O43541 AC002524.1-201ENST00000411687 547 ntBASIC5.65□□□□□ -1.5
SMAD6O43541 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.65□□□□□ -1.5
SMAD6O43541 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.65□□□□□ -1.5
SMAD6O43541 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.65□□□□□ -1.5
SMAD6O43541 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.65□□□□□ -1.5
SMAD6O43541 NANOGP9-201ENST00000439890 892 ntBASIC5.65□□□□□ -1.5
SMAD6O43541 ZNF736P6Y-201ENST00000447526 1213 ntBASIC5.65□□□□□ -1.5
SMAD6O43541 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.65□□□□□ -1.5
SMAD6O43541 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.65□□□□□ -1.5
SMAD6O43541 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SMAD6O43541 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC5.65□□□□□ -1.5
SMAD6O43541 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.65□□□□□ -1.5
SMAD6O43541 AC100832.1-201ENST00000471945 383 ntBASIC5.65□□□□□ -1.5
SMAD6O43541 SIAH1P1-201ENST00000479411 923 ntBASIC5.65□□□□□ -1.5
SMAD6O43541 OR2A3P-201ENST00000493774 953 ntBASIC5.65□□□□□ -1.5
SMAD6O43541 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.65□□□□□ -1.5
SMAD6O43541 AC108693.1-201ENST00000496068 432 ntBASIC5.65□□□□□ -1.5
SMAD6O43541 AC090638.1-201ENST00000498296 909 ntBASIC5.65□□□□□ -1.5
SMAD6O43541 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.65□□□□□ -1.5
SMAD6O43541 ST13P12-201ENST00000508958 1094 ntBASIC5.65□□□□□ -1.5
SMAD6O43541 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.65□□□□□ -1.5
SMAD6O43541 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SMAD6O43541 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.65□□□□□ -1.5
SMAD6O43541 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.65□□□□□ -1.5
SMAD6O43541 AP003049.1-201ENST00000529418 457 ntBASIC5.65□□□□□ -1.5
SMAD6O43541 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.65□□□□□ -1.5
SMAD6O43541 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.65□□□□□ -1.5
SMAD6O43541 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC5.65□□□□□ -1.5
SMAD6O43541 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.65□□□□□ -1.5
SMAD6O43541 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC5.65□□□□□ -1.5
SMAD6O43541 NPM1P5-201ENST00000557228 838 ntBASIC5.65□□□□□ -1.5
SMAD6O43541 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.65□□□□□ -1.5
SMAD6O43541 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.65□□□□□ -1.5
SMAD6O43541 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.65□□□□□ -1.5
SMAD6O43541 AC025857.2-201ENST00000602711 238 ntBASIC5.65□□□□□ -1.5
SMAD6O43541 AC096947.1-201ENST00000603233 470 ntBASIC5.65□□□□□ -1.5
SMAD6O43541 BNIP3P31-201ENST00000604515 566 ntBASIC5.65□□□□□ -1.5
SMAD6O43541 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.65□□□□□ -1.5
SMAD6O43541 WBP1LP8-201ENST00000617401 327 ntBASIC5.65□□□□□ -1.5
SMAD6O43541 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.65□□□□□ -1.5
SMAD6O43541 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.65□□□□□ -1.5
SMAD6O43541 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.65□□□□□ -1.51
SMAD6O43541 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms