Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 YWHAQP9-201ENST00000445891 512 ntBASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 AL031736.1-201ENST00000449688 618 ntBASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 AL590365.1-201ENST00000450788 243 ntBASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 RPL26P28-201ENST00000451325 435 ntBASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 AC135721.2-201ENST00000464237 300 ntBASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 THAP6-203ENST00000502620 582 ntTSL 3 BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 AC106822.1-201ENST00000502647 526 ntBASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 NAF1-205ENST00000509434 385 ntTSL 3 BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 STX18-IT1-201ENST00000515487 542 ntTSL 4 BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 OR4A12P-201ENST00000530847 918 ntBASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 ACER3-213ENST00000533873 929 ntTSL 2 BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 SMARCE1P3-201ENST00000553649 1231 ntBASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 AC018558.5-201ENST00000565840 952 ntBASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 AC141257.3-201ENST00000572906 215 ntBASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 RPL12P25-202ENST00000598100 674 ntBASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 AL360085.1-201ENST00000604713 532 ntBASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 AL078624.2-201ENST00000605063 554 ntBASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 AC069304.2-201ENST00000605154 435 ntBASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 AL096855.2-201ENST00000605785 369 ntBASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 AL451054.1-201ENST00000621770 772 ntBASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 CR392039.3-201ENST00000623236 227 ntTSL 5 BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 AC020978.8-201ENST00000571975 3022 ntBASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 AL161891.1-201ENST00000621575 4636 ntBASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 PXT1-201ENST00000454782 2108 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 SORBS1-208ENST00000371241 2055 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 UBE2V1-202ENST00000371657 1973 ntTSL 4 BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 ATF2-203ENST00000392544 1919 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 GABRE-201ENST00000370328 3152 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
PCDHB11Q9Y5F2 C11orf88-203ENST00000529167 3099 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
PCDHB11Q9Y5F2 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC7.38□□□□□ -1.23
PCDHB11Q9Y5F2 AF131215.2-201ENST00000531549 1710 ntBASIC7.38□□□□□ -1.23
PCDHB11Q9Y5F2 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
PCDHB11Q9Y5F2 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC7.38□□□□□ -1.23
PCDHB11Q9Y5F2 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
PCDHB11Q9Y5F2 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
PCDHB11Q9Y5F2 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
PCDHB11Q9Y5F2 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
PCDHB11Q9Y5F2 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
PCDHB11Q9Y5F2 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC7.38□□□□□ -1.23
PCDHB11Q9Y5F2 CA1-225ENST00000626824 2405 ntTSL 5 BASIC7.38□□□□□ -1.23
PCDHB11Q9Y5F2 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC7.38□□□□□ -1.23
PCDHB11Q9Y5F2 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC7.38□□□□□ -1.23
PCDHB11Q9Y5F2 MELK-207ENST00000536860 2342 ntTSL 2 BASIC7.38□□□□□ -1.23
PCDHB11Q9Y5F2 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC7.38□□□□□ -1.23
PCDHB11Q9Y5F2 C1D-202ENST00000407324 1379 ntTSL 3 BASIC7.38□□□□□ -1.23
PCDHB11Q9Y5F2 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC7.38□□□□□ -1.23
PCDHB11Q9Y5F2 OTX2-201ENST00000339475 3001 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
PCDHB11Q9Y5F2 Y_RNA.86-201ENST00000363020 111 ntBASIC7.38□□□□□ -1.23
PCDHB11Q9Y5F2 RNU6-216P-201ENST00000363282 104 ntBASIC7.38□□□□□ -1.23
PCDHB11Q9Y5F2 TRBV6-6-201ENST00000390371 388 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
PCDHB11Q9Y5F2 AL139135.1-201ENST00000412675 209 ntBASIC7.38□□□□□ -1.23
PCDHB11Q9Y5F2 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC7.38□□□□□ -1.23
PCDHB11Q9Y5F2 AL139128.1-201ENST00000413921 941 ntBASIC7.38□□□□□ -1.23
PCDHB11Q9Y5F2 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
PCDHB11Q9Y5F2 EIF4A1P5-201ENST00000428062 1095 ntBASIC7.38□□□□□ -1.23
PCDHB11Q9Y5F2 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC7.38□□□□□ -1.23
PCDHB11Q9Y5F2 AC002486.1-201ENST00000435098 391 ntBASIC7.38□□□□□ -1.23
PCDHB11Q9Y5F2 AL954705.1-201ENST00000435277 559 ntBASIC7.38□□□□□ -1.23
PCDHB11Q9Y5F2 SDCBPP1-201ENST00000440192 890 ntBASIC7.38□□□□□ -1.23
PCDHB11Q9Y5F2 RPL31P44-201ENST00000447680 377 ntBASIC7.38□□□□□ -1.23
PCDHB11Q9Y5F2 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC7.38□□□□□ -1.23
PCDHB11Q9Y5F2 MTND6P5-201ENST00000448266 512 ntBASIC7.38□□□□□ -1.23
PCDHB11Q9Y5F2 RPL7AP52-201ENST00000458096 790 ntBASIC7.38□□□□□ -1.23
PCDHB11Q9Y5F2 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC7.38□□□□□ -1.23
PCDHB11Q9Y5F2 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC7.38□□□□□ -1.23
PCDHB11Q9Y5F2 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
PCDHB11Q9Y5F2 RPL35P6-201ENST00000490024 372 ntBASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms