Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC098976.1-201ENST00000513014 541 ntBASIC5.58□□□□□ -1.52
CISHQ9NSE2 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.58□□□□□ -1.52
CISHQ9NSE2 AC027369.5-201ENST00000533838 755 ntBASIC5.58□□□□□ -1.52
CISHQ9NSE2 AC134349.2-201ENST00000535136 910 ntBASIC5.58□□□□□ -1.52
CISHQ9NSE2 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CISHQ9NSE2 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CISHQ9NSE2 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CISHQ9NSE2 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CISHQ9NSE2 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.58□□□□□ -1.52
CISHQ9NSE2 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CISHQ9NSE2 MTCYBP13-201ENST00000578634 1093 ntBASIC5.58□□□□□ -1.52
CISHQ9NSE2 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.58□□□□□ -1.52
CISHQ9NSE2 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.58□□□□□ -1.52
CISHQ9NSE2 AC126915.2-201ENST00000610957 190 ntBASIC5.58□□□□□ -1.52
CISHQ9NSE2 AL355480.1-201ENST00000629041 99 ntBASIC5.58□□□□□ -1.52
CISHQ9NSE2 AC135068.12-201ENST00000637370 931 ntBASIC5.58□□□□□ -1.52
CISHQ9NSE2 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CISHQ9NSE2 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
CISHQ9NSE2 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CISHQ9NSE2 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CISHQ9NSE2 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CISHQ9NSE2 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.58□□□□□ -1.52
CISHQ9NSE2 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CISHQ9NSE2 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CISHQ9NSE2 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.57□□□□□ -1.52
CISHQ9NSE2 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
CISHQ9NSE2 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CISHQ9NSE2 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CISHQ9NSE2 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.57□□□□□ -1.52
CISHQ9NSE2 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.57□□□□□ -1.52
CISHQ9NSE2 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CISHQ9NSE2 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CISHQ9NSE2 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CISHQ9NSE2 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CISHQ9NSE2 NUDT19P3-201ENST00000404698 555 ntBASIC5.57□□□□□ -1.52
CISHQ9NSE2 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.57□□□□□ -1.52
CISHQ9NSE2 AP000534.2-201ENST00000412729 568 ntBASIC5.57□□□□□ -1.52
CISHQ9NSE2 AL355433.1-201ENST00000422804 300 ntBASIC5.57□□□□□ -1.52
CISHQ9NSE2 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.57□□□□□ -1.52
CISHQ9NSE2 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.57□□□□□ -1.52
CISHQ9NSE2 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.57□□□□□ -1.52
CISHQ9NSE2 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.57□□□□□ -1.52
CISHQ9NSE2 REG1CP-206ENST00000447469 496 ntBASIC5.57□□□□□ -1.52
CISHQ9NSE2 GAPDHP14-201ENST00000450472 937 ntBASIC5.57□□□□□ -1.52
CISHQ9NSE2 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.57□□□□□ -1.52
CISHQ9NSE2 RN7SL172P-201ENST00000460535 303 ntBASIC5.57□□□□□ -1.52
CISHQ9NSE2 RN7SL30P-201ENST00000488416 306 ntBASIC5.57□□□□□ -1.52
CISHQ9NSE2 AC072052.1-201ENST00000496556 306 ntBASIC5.57□□□□□ -1.52
CISHQ9NSE2 AC093815.1-201ENST00000508637 280 ntBASIC5.57□□□□□ -1.52
CISHQ9NSE2 AC016559.2-201ENST00000510759 359 ntBASIC5.57□□□□□ -1.52
CISHQ9NSE2 GTF2F2P1-201ENST00000511083 675 ntBASIC5.57□□□□□ -1.52
CISHQ9NSE2 EIF3KP3-201ENST00000514461 639 ntBASIC5.57□□□□□ -1.52
CISHQ9NSE2 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.57□□□□□ -1.52
CISHQ9NSE2 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.57□□□□□ -1.52
CISHQ9NSE2 OR4A46P-201ENST00000527255 933 ntBASIC5.57□□□□□ -1.52
CISHQ9NSE2 AC024940.3-201ENST00000538551 316 ntBASIC5.57□□□□□ -1.52
CISHQ9NSE2 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.57□□□□□ -1.52
CISHQ9NSE2 AC004825.1-201ENST00000555068 586 ntBASIC5.57□□□□□ -1.52
CISHQ9NSE2 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.57□□□□□ -1.52
CISHQ9NSE2 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CISHQ9NSE2 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
CISHQ9NSE2 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.57□□□□□ -1.52
CISHQ9NSE2 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.57□□□□□ -1.52
CISHQ9NSE2 SUMO2P15-201ENST00000604285 278 ntBASIC5.57□□□□□ -1.52
CISHQ9NSE2 AP005131.7-201ENST00000610087 611 ntBASIC5.57□□□□□ -1.52
CISHQ9NSE2 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.57□□□□□ -1.52
CISHQ9NSE2 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CISHQ9NSE2 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.57□□□□□ -1.52
CISHQ9NSE2 AC118658.2-201ENST00000618697 459 ntBASIC5.57□□□□□ -1.52
CISHQ9NSE2 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.57□□□□□ -1.52
CISHQ9NSE2 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CISHQ9NSE2 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.57□□□□□ -1.52
CISHQ9NSE2 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CISHQ9NSE2 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CISHQ9NSE2 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CISHQ9NSE2 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
CISHQ9NSE2 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.57□□□□□ -1.52
CISHQ9NSE2 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CISHQ9NSE2 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CISHQ9NSE2 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.56□□□□□ -1.52
CISHQ9NSE2 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
CISHQ9NSE2 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CISHQ9NSE2 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CISHQ9NSE2 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CISHQ9NSE2 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CISHQ9NSE2 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.56□□□□□ -1.52
CISHQ9NSE2 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CISHQ9NSE2 MIR600-201ENST00000385007 98 ntBASIC5.56□□□□□ -1.52
CISHQ9NSE2 MIR1182-201ENST00000408363 97 ntBASIC5.56□□□□□ -1.52
CISHQ9NSE2 GTF3AP1-201ENST00000416942 1004 ntBASIC5.56□□□□□ -1.52
CISHQ9NSE2 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.56□□□□□ -1.52
CISHQ9NSE2 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.56□□□□□ -1.52
CISHQ9NSE2 NPM1P25-201ENST00000429734 854 ntBASIC5.56□□□□□ -1.52
CISHQ9NSE2 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.56□□□□□ -1.52
CISHQ9NSE2 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.56□□□□□ -1.52
CISHQ9NSE2 GAPDHP58-201ENST00000438477 1006 ntBASIC5.56□□□□□ -1.52
CISHQ9NSE2 FAR2P1-206ENST00000449736 709 ntBASIC5.56□□□□□ -1.52
CISHQ9NSE2 AC009127.1-201ENST00000467090 155 ntBASIC5.56□□□□□ -1.52
CISHQ9NSE2 AC079841.1-201ENST00000481228 950 ntBASIC5.56□□□□□ -1.52
CISHQ9NSE2 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 150 ms