Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 UBTFL9-201ENST00000534504 1148 ntBASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 MTND3P13-201ENST00000574391 343 ntBASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 PIGPP4-201ENST00000584447 307 ntBASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 AC113368.1-201ENST00000603736 382 ntBASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 AC022106.1-201ENST00000612834 766 ntBASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 AC008759.3-201ENST00000613300 508 ntBASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 AC125238.2-201ENST00000430003 1440 ntBASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SIMC1Q8NDZ2 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 AP001541.1-201ENST00000623322 1904 ntBASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 CASC19-260ENST00000641828 2001 ntBASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 AC008549.2-201ENST00000333482 706 ntBASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 RNA5SP350-201ENST00000363298 111 ntBASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 SNORD116-8-201ENST00000384365 95 ntBASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 AL445238.1-204ENST00000400311 463 ntBASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 VN1R20P-201ENST00000425215 966 ntBASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 HSPE1P16-201ENST00000426640 348 ntBASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 AC245047.2-201ENST00000441060 530 ntBASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 AC097359.1-201ENST00000447946 463 ntBASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 HSPE1P22-201ENST00000456856 327 ntBASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 RN7SL643P-201ENST00000471845 291 ntBASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 RPL12P31-201ENST00000478433 450 ntBASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 NPM1P29-201ENST00000483112 803 ntBASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 MTND4LP2-201ENST00000502312 285 ntBASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 RNU6-311P-201ENST00000516224 102 ntBASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 IGHV4-55-201ENST00000520889 368 ntBASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 IGHV1-14-201ENST00000523391 241 ntBASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 AP001094.1-201ENST00000579805 193 ntBASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 AP001267.4-201ENST00000602598 545 ntBASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 AC015982.1-201ENST00000608113 465 ntBASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 AL451049.1-201ENST00000608672 497 ntBASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 AC090425.2-201ENST00000608818 501 ntBASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 RDM1-219ENST00000615378 542 ntTSL 3 BASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 AC078880.5-201ENST00000617845 421 ntBASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 AC091304.6-201ENST00000619761 202 ntBASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 AC022400.9-201ENST00000623633 273 ntBASIC5.87□□□□□ -1.47
SIMC1Q8NDZ2 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms