Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NKX6-1P78426 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC5.69□□□□□ -1.5
NKX6-1P78426 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NKX6-1P78426 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NKX6-1P78426 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
NKX6-1P78426 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
NKX6-1P78426 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
NKX6-1P78426 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
NKX6-1P78426 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.69□□□□□ -1.5
NKX6-1P78426 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.69□□□□□ -1.5
NKX6-1P78426 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.69□□□□□ -1.5
NKX6-1P78426 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC5.69□□□□□ -1.5
NKX6-1P78426 AL049697.3-201ENST00000406493 982 ntBASIC5.69□□□□□ -1.5
NKX6-1P78426 SNORA77.2-201ENST00000408571 112 ntBASIC5.69□□□□□ -1.5
NKX6-1P78426 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NKX6-1P78426 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.69□□□□□ -1.5
NKX6-1P78426 RN7SKP108-201ENST00000411367 328 ntBASIC5.69□□□□□ -1.5
NKX6-1P78426 Z75741.2-201ENST00000417272 1167 ntBASIC5.69□□□□□ -1.5
NKX6-1P78426 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC5.69□□□□□ -1.5
NKX6-1P78426 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.69□□□□□ -1.5
NKX6-1P78426 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NKX6-1P78426 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.69□□□□□ -1.5
NKX6-1P78426 AC245884.2-201ENST00000426257 404 ntBASIC5.69□□□□□ -1.5
NKX6-1P78426 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.69□□□□□ -1.5
NKX6-1P78426 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.69□□□□□ -1.5
NKX6-1P78426 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.69□□□□□ -1.5
NKX6-1P78426 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC5.69□□□□□ -1.5
NKX6-1P78426 LDHAP2-201ENST00000437325 985 ntBASIC5.69□□□□□ -1.5
NKX6-1P78426 AMYP1-201ENST00000440059 1023 ntBASIC5.69□□□□□ -1.5
NKX6-1P78426 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.69□□□□□ -1.5
NKX6-1P78426 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
NKX6-1P78426 DNAJC19P5-201ENST00000443295 316 ntBASIC5.69□□□□□ -1.5
NKX6-1P78426 PTENP1-201ENST00000447117 1215 ntBASIC5.69□□□□□ -1.5
NKX6-1P78426 TVP23CP1-201ENST00000450317 639 ntBASIC5.69□□□□□ -1.5
NKX6-1P78426 SULT1D1P-201ENST00000458020 882 ntBASIC5.69□□□□□ -1.5
NKX6-1P78426 RN7SL254P-201ENST00000460609 284 ntBASIC5.69□□□□□ -1.5
NKX6-1P78426 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.69□□□□□ -1.5
NKX6-1P78426 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.69□□□□□ -1.5
NKX6-1P78426 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.69□□□□□ -1.5
NKX6-1P78426 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC5.69□□□□□ -1.5
NKX6-1P78426 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.69□□□□□ -1.5
NKX6-1P78426 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.69□□□□□ -1.5
NKX6-1P78426 SNORA3.4-201ENST00000515969 96 ntBASIC5.69□□□□□ -1.5
NKX6-1P78426 RN7SKP248-201ENST00000516278 305 ntBASIC5.69□□□□□ -1.5
NKX6-1P78426 snoZ278.1-201ENST00000517059 112 ntBASIC5.69□□□□□ -1.5
NKX6-1P78426 IGKV2D-10-201ENST00000520194 281 ntBASIC5.69□□□□□ -1.5
NKX6-1P78426 IGKV3D-34-201ENST00000522638 302 ntBASIC5.69□□□□□ -1.5
NKX6-1P78426 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.69□□□□□ -1.5
NKX6-1P78426 MTCO3P15-201ENST00000526563 574 ntBASIC5.69□□□□□ -1.5
NKX6-1P78426 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC5.69□□□□□ -1.5
NKX6-1P78426 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.69□□□□□ -1.5
NKX6-1P78426 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC5.69□□□□□ -1.5
NKX6-1P78426 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.69□□□□□ -1.5
NKX6-1P78426 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC5.69□□□□□ -1.5
NKX6-1P78426 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.69□□□□□ -1.5
NKX6-1P78426 AC015818.6-201ENST00000584274 634 ntBASIC5.69□□□□□ -1.5
NKX6-1P78426 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.69□□□□□ -1.5
NKX6-1P78426 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC5.69□□□□□ -1.5
NKX6-1P78426 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.69□□□□□ -1.5
NKX6-1P78426 AL020997.3-201ENST00000602843 359 ntBASIC5.69□□□□□ -1.5
NKX6-1P78426 AC004890.3-201ENST00000605566 1095 ntBASIC5.69□□□□□ -1.5
NKX6-1P78426 AC016877.3-201ENST00000606778 504 ntBASIC5.69□□□□□ -1.5
NKX6-1P78426 AC007349.4-201ENST00000608114 532 ntBASIC5.69□□□□□ -1.5
NKX6-1P78426 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
NKX6-1P78426 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
NKX6-1P78426 AC005277.2-201ENST00000617898 390 ntBASIC5.69□□□□□ -1.5
NKX6-1P78426 U1.31-201ENST00000620022 160 ntBASIC5.69□□□□□ -1.5
NKX6-1P78426 AC022079.1-201ENST00000621546 602 ntBASIC5.69□□□□□ -1.5
NKX6-1P78426 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC5.69□□□□□ -1.5
NKX6-1P78426 AC073488.9-201ENST00000631601 754 ntBASIC5.69□□□□□ -1.5
NKX6-1P78426 U6.107-201ENST00000637108 79 ntBASIC5.69□□□□□ -1.5
NKX6-1P78426 MIR4302-201ENST00000638058 60 ntBASIC5.69□□□□□ -1.5
NKX6-1P78426 LINC02211-204ENST00000642024 1070 ntBASIC5.69□□□□□ -1.5
NKX6-1P78426 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NKX6-1P78426 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
NKX6-1P78426 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
NKX6-1P78426 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC5.69□□□□□ -1.5
NKX6-1P78426 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.69□□□□□ -1.5
NKX6-1P78426 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NKX6-1P78426 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.69□□□□□ -1.5
NKX6-1P78426 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.69□□□□□ -1.5
NKX6-1P78426 PROS2P-201ENST00000474651 1951 ntBASIC5.69□□□□□ -1.5
NKX6-1P78426 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
NKX6-1P78426 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NKX6-1P78426 DOCK11P1-201ENST00000553480 5932 ntBASIC5.69□□□□□ -1.5
NKX6-1P78426 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
NKX6-1P78426 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NKX6-1P78426 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NKX6-1P78426 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
NKX6-1P78426 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
NKX6-1P78426 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.68□□□□□ -1.5
NKX6-1P78426 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NKX6-1P78426 CLCA3P-203ENST00000490028 2781 ntBASIC5.68□□□□□ -1.5
NKX6-1P78426 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NKX6-1P78426 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NKX6-1P78426 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
NKX6-1P78426 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.68□□□□□ -1.5
NKX6-1P78426 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NKX6-1P78426 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
NKX6-1P78426 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms