Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 STX3-208ENST00000641815 3236 ntBASIC5.89□□□□□ -1.47
TPM1P09493 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TPM1P09493 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TPM1P09493 MRE11P1-201ENST00000464884 2127 ntBASIC5.89□□□□□ -1.47
TPM1P09493 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.89□□□□□ -1.47
TPM1P09493 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
TPM1P09493 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TPM1P09493 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TPM1P09493 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
TPM1P09493 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TPM1P09493 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.88□□□□□ -1.47
TPM1P09493 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
TPM1P09493 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TPM1P09493 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
TPM1P09493 RNA5SP477-201ENST00000362639 119 ntBASIC5.88□□□□□ -1.47
TPM1P09493 RNA5SP131-201ENST00000365452 119 ntBASIC5.88□□□□□ -1.47
TPM1P09493 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TPM1P09493 AL359643.1-201ENST00000404109 423 ntBASIC5.88□□□□□ -1.47
TPM1P09493 GAPDHP42-201ENST00000406848 981 ntBASIC5.88□□□□□ -1.47
TPM1P09493 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.88□□□□□ -1.47
TPM1P09493 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.88□□□□□ -1.47
TPM1P09493 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.88□□□□□ -1.47
TPM1P09493 MTND6P12-201ENST00000428247 522 ntBASIC5.88□□□□□ -1.47
TPM1P09493 AMYP1-201ENST00000440059 1023 ntBASIC5.88□□□□□ -1.47
TPM1P09493 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
TPM1P09493 AC068491.1-201ENST00000449539 1241 ntBASIC5.88□□□□□ -1.47
TPM1P09493 AC093827.1-201ENST00000480094 861 ntBASIC5.88□□□□□ -1.47
TPM1P09493 RN7SL346P-201ENST00000491561 294 ntBASIC5.88□□□□□ -1.47
TPM1P09493 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.88□□□□□ -1.47
TPM1P09493 RN7SL356P-201ENST00000582228 248 ntBASIC5.88□□□□□ -1.47
TPM1P09493 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TPM1P09493 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.88□□□□□ -1.47
TPM1P09493 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TPM1P09493 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.88□□□□□ -1.47
TPM1P09493 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.88□□□□□ -1.47
TPM1P09493 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TPM1P09493 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
TPM1P09493 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.88□□□□□ -1.47
TPM1P09493 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TPM1P09493 SOCS5P3-201ENST00000425115 1576 ntBASIC5.88□□□□□ -1.47
TPM1P09493 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
TPM1P09493 SMG1P7-201ENST00000565246 2704 ntBASIC5.88□□□□□ -1.47
TPM1P09493 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TPM1P09493 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
TPM1P09493 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.87□□□□□ -1.47
TPM1P09493 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TPM1P09493 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TPM1P09493 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TPM1P09493 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.87□□□□□ -1.47
TPM1P09493 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TPM1P09493 RNU1-150P-201ENST00000362491 162 ntBASIC5.87□□□□□ -1.47
TPM1P09493 RNU6-249P-201ENST00000363016 102 ntBASIC5.87□□□□□ -1.47
TPM1P09493 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TPM1P09493 SUGT1P2-201ENST00000379452 992 ntBASIC5.87□□□□□ -1.47
TPM1P09493 DBIP1-201ENST00000401435 260 ntBASIC5.87□□□□□ -1.47
TPM1P09493 RNA5SP487-201ENST00000410186 122 ntBASIC5.87□□□□□ -1.47
TPM1P09493 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.87□□□□□ -1.47
TPM1P09493 BX323845.3-201ENST00000428215 527 ntBASIC5.87□□□□□ -1.47
TPM1P09493 KCTD9P1-201ENST00000430462 1167 ntBASIC5.87□□□□□ -1.47
TPM1P09493 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.87□□□□□ -1.47
TPM1P09493 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.87□□□□□ -1.47
TPM1P09493 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.87□□□□□ -1.47
TPM1P09493 AL450996.1-201ENST00000445574 1202 ntBASIC5.87□□□□□ -1.47
TPM1P09493 AP000547.1-201ENST00000454360 617 ntBASIC5.87□□□□□ -1.47
TPM1P09493 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.87□□□□□ -1.47
TPM1P09493 RNU6-615P-201ENST00000516065 106 ntBASIC5.87□□□□□ -1.47
TPM1P09493 SCARNA16.4-201ENST00000516956 187 ntBASIC5.87□□□□□ -1.47
TPM1P09493 OR10D4P-201ENST00000525892 951 ntBASIC5.87□□□□□ -1.47
TPM1P09493 RAB30-209ENST00000532548 644 ntTSL 3 BASIC5.87□□□□□ -1.47
TPM1P09493 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.87□□□□□ -1.47
TPM1P09493 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.87□□□□□ -1.47
TPM1P09493 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.87□□□□□ -1.47
TPM1P09493 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.87□□□□□ -1.47
TPM1P09493 AC015802.2-201ENST00000589690 189 ntBASIC5.87□□□□□ -1.47
TPM1P09493 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.87□□□□□ -1.47
TPM1P09493 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.87□□□□□ -1.47
TPM1P09493 PPATP2-201ENST00000605635 508 ntBASIC5.87□□□□□ -1.47
TPM1P09493 MIR6839-201ENST00000620425 113 ntBASIC5.87□□□□□ -1.47
TPM1P09493 AP000648.2-201ENST00000624182 404 ntBASIC5.87□□□□□ -1.47
TPM1P09493 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.87□□□□□ -1.47
TPM1P09493 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.87□□□□□ -1.47
TPM1P09493 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.87□□□□□ -1.47
TPM1P09493 NEAT1-202ENST00000501122 22743 ntBASIC5.87□□□□□ -1.47
TPM1P09493 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
TPM1P09493 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
TPM1P09493 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TPM1P09493 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
TPM1P09493 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TPM1P09493 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TPM1P09493 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TPM1P09493 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TPM1P09493 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
TPM1P09493 OR55B1P-203ENST00000641518 2602 ntBASIC5.86□□□□□ -1.47
TPM1P09493 AL022393.1-201ENST00000625142 1677 ntBASIC5.86□□□□□ -1.47
TPM1P09493 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.86□□□□□ -1.47
TPM1P09493 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
TPM1P09493 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
TPM1P09493 AL078599.1-201ENST00000402075 293 ntBASIC5.86□□□□□ -1.47
TPM1P09493 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TPM1P09493 OR6D1P-201ENST00000436165 939 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms