Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.22□□□□□ -1.73
SSSCA1O60232 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.22□□□□□ -1.73
SSSCA1O60232 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
SSSCA1O60232 RN7SKP257-201ENST00000364525 309 ntBASIC4.22□□□□□ -1.73
SSSCA1O60232 MIR191-201ENST00000384873 92 ntBASIC4.22□□□□□ -1.73
SSSCA1O60232 HMGB1P20-201ENST00000402555 677 ntBASIC4.22□□□□□ -1.73
SSSCA1O60232 AL359643.1-201ENST00000404109 423 ntBASIC4.22□□□□□ -1.73
SSSCA1O60232 GAPDHP42-201ENST00000406848 981 ntBASIC4.22□□□□□ -1.73
SSSCA1O60232 U3.32-201ENST00000408116 212 ntBASIC4.22□□□□□ -1.73
SSSCA1O60232 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC4.22□□□□□ -1.73
SSSCA1O60232 AL035660.1-201ENST00000422041 222 ntBASIC4.22□□□□□ -1.73
SSSCA1O60232 AL133173.1-201ENST00000423458 397 ntBASIC4.22□□□□□ -1.73
SSSCA1O60232 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.22□□□□□ -1.73
SSSCA1O60232 AL136455.1-201ENST00000441083 1240 ntBASIC4.22□□□□□ -1.73
SSSCA1O60232 AL450996.1-201ENST00000445574 1202 ntBASIC4.22□□□□□ -1.73
SSSCA1O60232 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SSSCA1O60232 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.22□□□□□ -1.73
SSSCA1O60232 AC091180.1-201ENST00000462104 372 ntBASIC4.22□□□□□ -1.73
SSSCA1O60232 AC018797.1-201ENST00000510791 255 ntBASIC4.22□□□□□ -1.73
SSSCA1O60232 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.22□□□□□ -1.73
SSSCA1O60232 AC138938.1-201ENST00000515431 782 ntBASIC4.22□□□□□ -1.73
SSSCA1O60232 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SSSCA1O60232 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.22□□□□□ -1.73
SSSCA1O60232 AC121758.1-202ENST00000556917 658 ntBASIC4.22□□□□□ -1.73
SSSCA1O60232 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SSSCA1O60232 RBM22P12-201ENST00000567098 1255 ntBASIC4.22□□□□□ -1.73
SSSCA1O60232 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SSSCA1O60232 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC4.22□□□□□ -1.73
SSSCA1O60232 AC005252.1-201ENST00000604518 1063 ntBASIC4.22□□□□□ -1.73
SSSCA1O60232 BNIP3P35-201ENST00000604530 490 ntBASIC4.22□□□□□ -1.73
SSSCA1O60232 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC4.22□□□□□ -1.73
SSSCA1O60232 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC4.22□□□□□ -1.73
SSSCA1O60232 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.22□□□□□ -1.73
SSSCA1O60232 TEX41-279ENST00000629149 609 ntTSL 5 BASIC4.22□□□□□ -1.73
SSSCA1O60232 AC111152.1-202ENST00000635848 339 ntBASIC4.22□□□□□ -1.73
SSSCA1O60232 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC4.22□□□□□ -1.73
SSSCA1O60232 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC4.22□□□□□ -1.73
SSSCA1O60232 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
SSSCA1O60232 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SSSCA1O60232 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
SSSCA1O60232 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
SSSCA1O60232 AC139713.2-215ENST00000641428 5037 ntBASIC4.21□□□□□ -1.73
SSSCA1O60232 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.21□□□□□ -1.73
SSSCA1O60232 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
SSSCA1O60232 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
SSSCA1O60232 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
SSSCA1O60232 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.21□□□□□ -1.74
SSSCA1O60232 RNA5SP232-201ENST00000364144 119 ntBASIC4.21□□□□□ -1.74
SSSCA1O60232 RN7SKP86-201ENST00000410454 332 ntBASIC4.21□□□□□ -1.74
SSSCA1O60232 AL445213.1-201ENST00000412589 747 ntBASIC4.21□□□□□ -1.74
SSSCA1O60232 SETP15-201ENST00000412724 337 ntBASIC4.21□□□□□ -1.74
SSSCA1O60232 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC4.21□□□□□ -1.74
SSSCA1O60232 Z82198.3-201ENST00000421145 199 ntBASIC4.21□□□□□ -1.74
SSSCA1O60232 AL161722.2-201ENST00000434731 981 ntBASIC4.21□□□□□ -1.74
SSSCA1O60232 AL512637.1-201ENST00000439523 1231 ntBASIC4.21□□□□□ -1.74
SSSCA1O60232 AC005297.1-201ENST00000444765 862 ntBASIC4.21□□□□□ -1.74
SSSCA1O60232 AL031584.1-201ENST00000447169 754 ntBASIC4.21□□□□□ -1.74
SSSCA1O60232 AC021006.1-201ENST00000489849 553 ntBASIC4.21□□□□□ -1.74
SSSCA1O60232 RN7SL568P-201ENST00000493069 298 ntBASIC4.21□□□□□ -1.74
SSSCA1O60232 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC4.21□□□□□ -1.74
SSSCA1O60232 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SSSCA1O60232 HMGB1P44-201ENST00000508597 572 ntBASIC4.21□□□□□ -1.74
SSSCA1O60232 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC4.21□□□□□ -1.74
SSSCA1O60232 RN7SKP46-201ENST00000515942 234 ntBASIC4.21□□□□□ -1.74
SSSCA1O60232 AC027308.1-201ENST00000517993 110 ntBASIC4.21□□□□□ -1.74
SSSCA1O60232 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.21□□□□□ -1.74
SSSCA1O60232 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.21□□□□□ -1.74
SSSCA1O60232 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.21□□□□□ -1.74
SSSCA1O60232 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC4.21□□□□□ -1.74
SSSCA1O60232 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.21□□□□□ -1.74
SSSCA1O60232 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
SSSCA1O60232 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC4.21□□□□□ -1.74
SSSCA1O60232 IGBP1P1-201ENST00000554337 1009 ntBASIC4.21□□□□□ -1.74
SSSCA1O60232 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC4.21□□□□□ -1.74
SSSCA1O60232 AGGF1P9-201ENST00000561884 913 ntBASIC4.21□□□□□ -1.74
SSSCA1O60232 AC092121.1-201ENST00000569452 202 ntBASIC4.21□□□□□ -1.74
SSSCA1O60232 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.21□□□□□ -1.74
SSSCA1O60232 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.21□□□□□ -1.74
SSSCA1O60232 AC011500.1-201ENST00000601963 469 ntBASIC4.21□□□□□ -1.74
SSSCA1O60232 AC022001.1-201ENST00000605193 268 ntBASIC4.21□□□□□ -1.74
SSSCA1O60232 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC4.21□□□□□ -1.74
SSSCA1O60232 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
SSSCA1O60232 AC108359.1-201ENST00000616451 1211 ntBASIC4.21□□□□□ -1.74
SSSCA1O60232 AC022106.2-201ENST00000620114 757 ntBASIC4.21□□□□□ -1.74
SSSCA1O60232 MTCO1P1-201ENST00000624263 1081 ntBASIC4.21□□□□□ -1.74
SSSCA1O60232 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SSSCA1O60232 ACADSB-202ENST00000368869 1599 ntTSL 2 BASIC4.21□□□□□ -1.74
SSSCA1O60232 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
SSSCA1O60232 AC022306.1-201ENST00000560489 1562 ntBASIC4.21□□□□□ -1.74
SSSCA1O60232 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SSSCA1O60232 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.21□□□□□ -1.74
SSSCA1O60232 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
SSSCA1O60232 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SSSCA1O60232 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.21□□□□□ -1.74
SSSCA1O60232 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC4.21□□□□□ -1.74
SSSCA1O60232 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SSSCA1O60232 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
SSSCA1O60232 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SSSCA1O60232 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SSSCA1O60232 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms