Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AL451061.1-201ENST00000407887 862 ntBASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 RNA5SP498-201ENST00000411342 120 ntBASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 BCRP8-201ENST00000412037 255 ntBASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 AL773545.3-201ENST00000414297 706 ntBASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 TMBIM7P-201ENST00000418074 855 ntBASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 AC083875.1-201ENST00000419509 405 ntBASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 AC097468.2-201ENST00000429343 553 ntTSL 4 BASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 DDX11L10-201ENST00000430178 571 ntBASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 ANKRD54P1-201ENST00000433115 471 ntBASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 AL512605.1-202ENST00000441919 381 ntBASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 RPL7P42-201ENST00000481005 679 ntBASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 RN7SL635P-201ENST00000492123 296 ntBASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 AC138409.2-202ENST00000507274 458 ntBASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 OR51A1P-201ENST00000511110 946 ntBASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 RNU6-885P-201ENST00000516607 104 ntBASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 IGKV1D-32-201ENST00000517449 318 ntBASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 AC100823.2-201ENST00000518337 699 ntBASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 KDM1B-203ENST00000546309 496 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 AC016629.2-201ENST00000597341 199 ntBASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 AC008385.1-201ENST00000604421 355 ntBASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 AP004247.3-201ENST00000608682 624 ntBASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 AC103710.4-201ENST00000609301 899 ntBASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 MILR1-202ENST00000612535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 YWHAEP7-203ENST00000622054 312 ntBASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 AC116563.2-201ENST00000624751 535 ntBASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 COL6A4P1-202ENST00000487147 4317 ntBASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 KIAA0753-201ENST00000361413 4859 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
PCDHB11Q9Y5F2 CCT8P1-201ENST00000413611 1657 ntBASIC7.4□□□□□ -1.23
PCDHB11Q9Y5F2 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
PCDHB11Q9Y5F2 TROVE2-201ENST00000367441 1791 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
PCDHB11Q9Y5F2 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC7.4□□□□□ -1.23
PCDHB11Q9Y5F2 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
PCDHB11Q9Y5F2 ARHGAP42P1-201ENST00000507474 1976 ntBASIC7.4□□□□□ -1.23
PCDHB11Q9Y5F2 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
PCDHB11Q9Y5F2 ZNF595-204ENST00000609518 2115 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.23
PCDHB11Q9Y5F2 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
PCDHB11Q9Y5F2 TPD52-202ENST00000379097 2563 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
PCDHB11Q9Y5F2 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC7.4□□□□□ -1.23
PCDHB11Q9Y5F2 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC7.4□□□□□ -1.23
PCDHB11Q9Y5F2 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
PCDHB11Q9Y5F2 MFSD8-218ENST00000641186 4448 ntBASIC7.4□□□□□ -1.23
PCDHB11Q9Y5F2 AC012213.2-201ENST00000562917 4597 ntBASIC7.4□□□□□ -1.23
PCDHB11Q9Y5F2 PDLIM5-221ENST00000542407 2979 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 AC008498.2-201ENST00000624033 2322 ntBASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 CDY2B-201ENST00000382867 1961 ntAPPRIS ALT1 BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 AC053481.2-201ENST00000602493 1815 ntTSL 5 BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 ATP5A1P10-201ENST00000622403 1603 ntBASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 CUBN-201ENST00000377823 705 ntTSL 3 BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 AL139327.1-201ENST00000382988 348 ntBASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 GSTA10P-201ENST00000412182 576 ntBASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 RSU1P3-201ENST00000412878 835 ntBASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 PGAM1P3-201ENST00000420790 565 ntBASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 RPSAP1-201ENST00000421328 880 ntBASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 AC073335.1-201ENST00000427776 363 ntBASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 RPL7P56-201ENST00000429441 717 ntBASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 AC009961.2-201ENST00000435771 251 ntBASIC7.39□□□□□ -1.23
PCDHB11Q9Y5F2 MTCYBP6-201ENST00000441810 138 ntBASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms