Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 PSMD10P2-201ENST00000432890 672 ntBASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 RNU7-27P-201ENST00000459281 62 ntBASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 RN7SL392P-201ENST00000473024 299 ntBASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 RN7SL267P-201ENST00000485107 261 ntBASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 OR52H2P-201ENST00000514607 902 ntBASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 SCARNA11.1-201ENST00000516918 132 ntBASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 AAMDC-203ENST00000525034 511 ntTSL 3 BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 RGS4-207ENST00000527809 817 ntTSL 4 BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 AC008126.1-201ENST00000549019 480 ntBASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 AC137056.1-202ENST00000575772 753 ntTSL 2 BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 AC061975.3-201ENST00000583209 244 ntBASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 LLPHP1-201ENST00000603571 367 ntBASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 NQO2-209ENST00000606474 470 ntTSL 3 BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 RN7SL778P-201ENST00000607160 297 ntBASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 AC068726.1-201ENST00000610993 341 ntBASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 C5orf56-207ENST00000621237 486 ntAPPRIS P5 TSL 2 BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 TEX41-254ENST00000626394 423 ntTSL 5 BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 ATE1-AS1-202ENST00000636460 506 ntBASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 CRNDE-214ENST00000637011 865 ntTSL 5 BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 HCG18-244ENST00000602516 2890 ntBASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 PIGN-231ENST00000639174 4095 ntTSL 5 BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 JAZF1-201ENST00000283928 3125 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 C1orf131-203ENST00000366651 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 C12orf77-202ENST00000549262 1443 ntTSL 4 BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 PDIK1L-201ENST00000374269 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 GUCY2F-201ENST00000218006 3714 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 ZNF567-204ENST00000588311 2042 ntTSL 2 BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 AL356361.1-201ENST00000400943 1459 ntBASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 DGKB-205ENST00000406247 3257 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 TDGF1P3-202ENST00000602699 2710 ntBASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 AC003973.3-201ENST00000624863 2822 ntBASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
LIMD1Q9UGP4 ATP5A1P10-201ENST00000622403 1603 ntBASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 MBTPS2-201ENST00000365779 4457 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 EPB41L5-202ENST00000331393 1777 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 EIF4B-201ENST00000262056 4148 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 AL365475.1-201ENST00000565135 1949 ntBASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 HKR1-203ENST00000541583 2758 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 MATR3-232ENST00000502929 4373 ntTSL 2 BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 CCT5-201ENST00000280326 3675 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 Y_RNA.326-201ENST00000365176 113 ntBASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 LARP1P1-201ENST00000407692 292 ntBASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 VN1R8P-201ENST00000407739 893 ntBASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 AL354751.2-201ENST00000415471 210 ntBASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 AC092634.6-201ENST00000418558 192 ntBASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 TEX41-204ENST00000423031 491 ntTSL 4 BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 SDCBPP2-201ENST00000424643 885 ntBASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 AC011747.1-201ENST00000425678 565 ntTSL 4 BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 AC009988.1-201ENST00000434988 310 ntTSL 5 BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC7.92□□□□□ -1.14
LIMD1Q9UGP4 AC239798.3-201ENST00000454459 408 ntBASIC7.92□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms