Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CHD7Q9P2D1 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CHD7Q9P2D1 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.31□□□□□ -1.56
CHD7Q9P2D1 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CHD7Q9P2D1 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CHD7Q9P2D1 AP000542.3-201ENST00000623391 6114 ntBASIC5.31□□□□□ -1.56
CHD7Q9P2D1 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.31□□□□□ -1.56
CHD7Q9P2D1 CASKP1-201ENST00000412870 582 ntBASIC5.31□□□□□ -1.56
CHD7Q9P2D1 RPS27AP12-201ENST00000429552 465 ntBASIC5.31□□□□□ -1.56
CHD7Q9P2D1 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.31□□□□□ -1.56
CHD7Q9P2D1 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.31□□□□□ -1.56
CHD7Q9P2D1 REG1CP-206ENST00000447469 496 ntBASIC5.31□□□□□ -1.56
CHD7Q9P2D1 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CHD7Q9P2D1 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.31□□□□□ -1.56
CHD7Q9P2D1 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CHD7Q9P2D1 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.31□□□□□ -1.56
CHD7Q9P2D1 CYCSP1-201ENST00000604815 315 ntBASIC5.31□□□□□ -1.56
CHD7Q9P2D1 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.31□□□□□ -1.56
CHD7Q9P2D1 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CHD7Q9P2D1 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CHD7Q9P2D1 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CHD7Q9P2D1 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CHD7Q9P2D1 KLHL3-209ENST00000508657 6981 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CHD7Q9P2D1 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CHD7Q9P2D1 TANC2-201ENST00000389520 6404 ntTSL 5 BASIC5.3□□□□□ -1.56
CHD7Q9P2D1 OR6C69P-201ENST00000394268 893 ntBASIC5.3□□□□□ -1.56
CHD7Q9P2D1 SNORA11C-201ENST00000408532 129 ntBASIC5.3□□□□□ -1.56
CHD7Q9P2D1 CR383656.1-201ENST00000484916 377 ntBASIC5.3□□□□□ -1.56
CHD7Q9P2D1 RN7SL814P-201ENST00000487715 300 ntBASIC5.3□□□□□ -1.56
CHD7Q9P2D1 ENPP7P9-201ENST00000514456 627 ntBASIC5.3□□□□□ -1.56
CHD7Q9P2D1 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.3□□□□□ -1.56
CHD7Q9P2D1 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.3□□□□□ -1.56
CHD7Q9P2D1 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.3□□□□□ -1.56
CHD7Q9P2D1 AC022916.3-201ENST00000592961 742 ntBASIC5.3□□□□□ -1.56
CHD7Q9P2D1 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CHD7Q9P2D1 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CHD7Q9P2D1 GIGYF2-205ENST00000409547 5978 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CHD7Q9P2D1 LSAMP-205ENST00000490035 9446 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CHD7Q9P2D1 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CHD7Q9P2D1 AC009962.1-201ENST00000567327 3813 ntBASIC5.3□□□□□ -1.56
CHD7Q9P2D1 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CHD7Q9P2D1 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CHD7Q9P2D1 SLMAP-203ENST00000383718 6749 ntTSL 2 BASIC5.3□□□□□ -1.56
CHD7Q9P2D1 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CHD7Q9P2D1 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CHD7Q9P2D1 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CHD7Q9P2D1 HYALP1-201ENST00000417674 1279 ntBASIC5.3□□□□□ -1.56
CHD7Q9P2D1 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.3□□□□□ -1.56
CHD7Q9P2D1 AC093827.1-201ENST00000480094 861 ntBASIC5.3□□□□□ -1.56
CHD7Q9P2D1 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.3□□□□□ -1.56
CHD7Q9P2D1 AL121890.3-201ENST00000618494 516 ntBASIC5.3□□□□□ -1.56
CHD7Q9P2D1 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CHD7Q9P2D1 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CHD7Q9P2D1 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.3□□□□□ -1.56
CHD7Q9P2D1 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CHD7Q9P2D1 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.3□□□□□ -1.56
CHD7Q9P2D1 AL512590.3-202ENST00000534123 6463 ntTSL 2 BASIC5.29□□□□□ -1.56
CHD7Q9P2D1 OR2M4-202ENST00000641868 5934 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CHD7Q9P2D1 MAPK10-338ENST00000641647 3362 ntBASIC5.29□□□□□ -1.56
CHD7Q9P2D1 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CHD7Q9P2D1 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CHD7Q9P2D1 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CHD7Q9P2D1 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CHD7Q9P2D1 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CHD7Q9P2D1 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CHD7Q9P2D1 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.29□□□□□ -1.56
CHD7Q9P2D1 OR4C10P-201ENST00000434991 931 ntBASIC5.29□□□□□ -1.56
CHD7Q9P2D1 IGHV5-78-201ENST00000450948 295 ntBASIC5.29□□□□□ -1.56
CHD7Q9P2D1 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.29□□□□□ -1.56
CHD7Q9P2D1 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.29□□□□□ -1.56
CHD7Q9P2D1 HMGB1P4-201ENST00000455362 567 ntBASIC5.29□□□□□ -1.56
CHD7Q9P2D1 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.29□□□□□ -1.56
CHD7Q9P2D1 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.29□□□□□ -1.56
CHD7Q9P2D1 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.29□□□□□ -1.56
CHD7Q9P2D1 AC006130.2-201ENST00000586202 326 ntBASIC5.29□□□□□ -1.56
CHD7Q9P2D1 CCDC58P3-201ENST00000590792 430 ntBASIC5.29□□□□□ -1.56
CHD7Q9P2D1 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CHD7Q9P2D1 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CHD7Q9P2D1 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CHD7Q9P2D1 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.29□□□□□ -1.56
CHD7Q9P2D1 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.29□□□□□ -1.56
CHD7Q9P2D1 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CHD7Q9P2D1 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC5.29□□□□□ -1.56
CHD7Q9P2D1 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CHD7Q9P2D1 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.29□□□□□ -1.56
CHD7Q9P2D1 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CHD7Q9P2D1 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CHD7Q9P2D1 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CHD7Q9P2D1 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CHD7Q9P2D1 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CHD7Q9P2D1 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CHD7Q9P2D1 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CHD7Q9P2D1 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.29□□□□□ -1.56
CHD7Q9P2D1 AL451062.2-201ENST00000427515 271 ntBASIC5.29□□□□□ -1.56
CHD7Q9P2D1 CRIP1P1-201ENST00000427567 185 ntBASIC5.29□□□□□ -1.56
CHD7Q9P2D1 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.29□□□□□ -1.56
CHD7Q9P2D1 AL161722.2-201ENST00000434731 981 ntBASIC5.29□□□□□ -1.56
CHD7Q9P2D1 CBX1P1-201ENST00000440184 427 ntBASIC5.29□□□□□ -1.56
CHD7Q9P2D1 NIFKP7-201ENST00000503365 834 ntBASIC5.29□□□□□ -1.56
CHD7Q9P2D1 AC130364.2-201ENST00000528639 604 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms