Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.57□□□□□ -1.36
RPAP1Q9BWH6 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RPAP1Q9BWH6 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RPAP1Q9BWH6 ZNF733P-202ENST00000444809 1573 ntBASIC6.57□□□□□ -1.36
RPAP1Q9BWH6 AL162456.1-201ENST00000634535 2006 ntBASIC6.57□□□□□ -1.36
RPAP1Q9BWH6 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.57□□□□□ -1.36
RPAP1Q9BWH6 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RPAP1Q9BWH6 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
RPAP1Q9BWH6 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC6.57□□□□□ -1.36
RPAP1Q9BWH6 HSPE1P27-201ENST00000430808 296 ntBASIC6.57□□□□□ -1.36
RPAP1Q9BWH6 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC6.57□□□□□ -1.36
RPAP1Q9BWH6 AL672138.1-201ENST00000450604 1015 ntBASIC6.57□□□□□ -1.36
RPAP1Q9BWH6 AL389915.2-201ENST00000454576 441 ntBASIC6.57□□□□□ -1.36
RPAP1Q9BWH6 PSAT1P4-201ENST00000466500 526 ntBASIC6.57□□□□□ -1.36
RPAP1Q9BWH6 RN7SL860P-201ENST00000473738 223 ntBASIC6.57□□□□□ -1.36
RPAP1Q9BWH6 AC130364.2-201ENST00000528639 604 ntBASIC6.57□□□□□ -1.36
RPAP1Q9BWH6 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.57□□□□□ -1.36
RPAP1Q9BWH6 OR4A43P-201ENST00000532938 908 ntBASIC6.57□□□□□ -1.36
RPAP1Q9BWH6 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC6.57□□□□□ -1.36
RPAP1Q9BWH6 OR11H3P-201ENST00000554547 982 ntBASIC6.57□□□□□ -1.36
RPAP1Q9BWH6 AC090286.3-201ENST00000573133 187 ntBASIC6.57□□□□□ -1.36
RPAP1Q9BWH6 AC027216.1-201ENST00000577726 685 ntBASIC6.57□□□□□ -1.36
RPAP1Q9BWH6 RBM22P1-201ENST00000578589 1214 ntBASIC6.57□□□□□ -1.36
RPAP1Q9BWH6 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.57□□□□□ -1.36
RPAP1Q9BWH6 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.57□□□□□ -1.36
RPAP1Q9BWH6 AC135068.5-201ENST00000624197 983 ntBASIC6.57□□□□□ -1.36
RPAP1Q9BWH6 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.56□□□□□ -1.36
RPAP1Q9BWH6 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
RPAP1Q9BWH6 AC004158.1-201ENST00000564508 4319 ntBASIC6.56□□□□□ -1.36
RPAP1Q9BWH6 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RPAP1Q9BWH6 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.56□□□□□ -1.36
RPAP1Q9BWH6 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
RPAP1Q9BWH6 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
RPAP1Q9BWH6 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RPAP1Q9BWH6 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
RPAP1Q9BWH6 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RPAP1Q9BWH6 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RPAP1Q9BWH6 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RPAP1Q9BWH6 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RPAP1Q9BWH6 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RPAP1Q9BWH6 SNORA67-201ENST00000384423 137 ntBASIC6.56□□□□□ -1.36
RPAP1Q9BWH6 SNORD56.6-201ENST00000384569 71 ntBASIC6.56□□□□□ -1.36
RPAP1Q9BWH6 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
RPAP1Q9BWH6 PPIAP9-201ENST00000403866 498 ntBASIC6.56□□□□□ -1.36
RPAP1Q9BWH6 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.56□□□□□ -1.36
RPAP1Q9BWH6 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.56□□□□□ -1.36
RPAP1Q9BWH6 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.56□□□□□ -1.36
RPAP1Q9BWH6 AL645937.3-201ENST00000453647 936 ntBASIC6.56□□□□□ -1.36
RPAP1Q9BWH6 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.56□□□□□ -1.36
RPAP1Q9BWH6 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.56□□□□□ -1.36
RPAP1Q9BWH6 HMGB1P44-201ENST00000508597 572 ntBASIC6.56□□□□□ -1.36
RPAP1Q9BWH6 AC026782.2-201ENST00000510845 636 ntBASIC6.56□□□□□ -1.36
RPAP1Q9BWH6 RN7SKP99-201ENST00000517028 307 ntBASIC6.56□□□□□ -1.36
RPAP1Q9BWH6 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.56□□□□□ -1.36
RPAP1Q9BWH6 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.56□□□□□ -1.36
RPAP1Q9BWH6 AP000769.2-201ENST00000602344 396 ntBASIC6.56□□□□□ -1.36
RPAP1Q9BWH6 AC087763.1-201ENST00000603391 286 ntBASIC6.56□□□□□ -1.36
RPAP1Q9BWH6 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC6.56□□□□□ -1.36
RPAP1Q9BWH6 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RPAP1Q9BWH6 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
RPAP1Q9BWH6 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.55□□□□□ -1.36
RPAP1Q9BWH6 AC092376.2-201ENST00000622621 4116 ntBASIC6.55□□□□□ -1.36
RPAP1Q9BWH6 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.55□□□□□ -1.36
RPAP1Q9BWH6 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
RPAP1Q9BWH6 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
RPAP1Q9BWH6 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
RPAP1Q9BWH6 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC6.55□□□□□ -1.36
RPAP1Q9BWH6 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
RPAP1Q9BWH6 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RPAP1Q9BWH6 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RPAP1Q9BWH6 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
RPAP1Q9BWH6 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.55□□□□□ -1.36
RPAP1Q9BWH6 AC136624.1-201ENST00000400791 413 ntBASIC6.55□□□□□ -1.36
RPAP1Q9BWH6 AL109941.1-201ENST00000401925 229 ntBASIC6.55□□□□□ -1.36
RPAP1Q9BWH6 AL645733.1-201ENST00000402250 217 ntBASIC6.55□□□□□ -1.36
RPAP1Q9BWH6 VN1R54P-201ENST00000435210 1049 ntBASIC6.55□□□□□ -1.36
RPAP1Q9BWH6 AL359265.1-201ENST00000440296 795 ntBASIC6.55□□□□□ -1.36
RPAP1Q9BWH6 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC6.55□□□□□ -1.36
RPAP1Q9BWH6 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.55□□□□□ -1.36
RPAP1Q9BWH6 HMGB1P40-201ENST00000525121 540 ntBASIC6.55□□□□□ -1.36
RPAP1Q9BWH6 AC079064.1-201ENST00000528365 362 ntBASIC6.55□□□□□ -1.36
RPAP1Q9BWH6 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.55□□□□□ -1.36
RPAP1Q9BWH6 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
RPAP1Q9BWH6 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RPAP1Q9BWH6 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.55□□□□□ -1.36
RPAP1Q9BWH6 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC6.55□□□□□ -1.36
RPAP1Q9BWH6 AL356608.1-201ENST00000610034 820 ntBASIC6.55□□□□□ -1.36
RPAP1Q9BWH6 Mico1.1-201ENST00000611698 204 ntBASIC6.55□□□□□ -1.36
RPAP1Q9BWH6 AL049539.1-201ENST00000611964 459 ntBASIC6.55□□□□□ -1.36
RPAP1Q9BWH6 AP002505.2-201ENST00000623585 696 ntBASIC6.55□□□□□ -1.36
RPAP1Q9BWH6 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RPAP1Q9BWH6 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RPAP1Q9BWH6 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.54□□□□□ -1.36
RPAP1Q9BWH6 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
RPAP1Q9BWH6 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RPAP1Q9BWH6 DNM1P47-203ENST00000571780 12667 ntBASIC6.54□□□□□ -1.36
RPAP1Q9BWH6 RPL23P2-201ENST00000320371 421 ntBASIC6.54□□□□□ -1.36
RPAP1Q9BWH6 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RPAP1Q9BWH6 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RPAP1Q9BWH6 RNA5SP487-201ENST00000410186 122 ntBASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms