Protein–RNA interactions for Protein: Q9BQP9

BPIFA3, BPI fold-containing family A member 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BPIFA3Q9BQP9 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
BPIFA3Q9BQP9 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
BPIFA3Q9BQP9 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
BPIFA3Q9BQP9 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
BPIFA3Q9BQP9 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
BPIFA3Q9BQP9 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
BPIFA3Q9BQP9 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.82□□□□□ -1.48
BPIFA3Q9BQP9 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
BPIFA3Q9BQP9 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.82□□□□□ -1.48
BPIFA3Q9BQP9 OR52B3P-201ENST00000314715 928 ntBASIC5.82□□□□□ -1.48
BPIFA3Q9BQP9 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
BPIFA3Q9BQP9 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.82□□□□□ -1.48
BPIFA3Q9BQP9 CDY8P-201ENST00000428380 1279 ntBASIC5.82□□□□□ -1.48
BPIFA3Q9BQP9 KCTD9P1-201ENST00000430462 1167 ntBASIC5.82□□□□□ -1.48
BPIFA3Q9BQP9 FMO7P-201ENST00000436045 768 ntBASIC5.82□□□□□ -1.48
BPIFA3Q9BQP9 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.82□□□□□ -1.48
BPIFA3Q9BQP9 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
BPIFA3Q9BQP9 CDY20P-201ENST00000447528 1279 ntBASIC5.82□□□□□ -1.48
BPIFA3Q9BQP9 AL445665.1-202ENST00000452436 324 ntBASIC5.82□□□□□ -1.48
BPIFA3Q9BQP9 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.82□□□□□ -1.48
BPIFA3Q9BQP9 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.82□□□□□ -1.48
BPIFA3Q9BQP9 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.82□□□□□ -1.48
BPIFA3Q9BQP9 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.82□□□□□ -1.48
BPIFA3Q9BQP9 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.82□□□□□ -1.48
BPIFA3Q9BQP9 AC068993.1-201ENST00000546724 589 ntBASIC5.82□□□□□ -1.48
BPIFA3Q9BQP9 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.82□□□□□ -1.48
BPIFA3Q9BQP9 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.82□□□□□ -1.48
BPIFA3Q9BQP9 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.82□□□□□ -1.48
BPIFA3Q9BQP9 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
BPIFA3Q9BQP9 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.82□□□□□ -1.48
BPIFA3Q9BQP9 RN7SL435P-201ENST00000584418 282 ntBASIC5.82□□□□□ -1.48
BPIFA3Q9BQP9 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
BPIFA3Q9BQP9 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.82□□□□□ -1.48
BPIFA3Q9BQP9 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.82□□□□□ -1.48
BPIFA3Q9BQP9 AC118658.2-201ENST00000618697 459 ntBASIC5.82□□□□□ -1.48
BPIFA3Q9BQP9 CU639417.4-201ENST00000623928 207 ntBASIC5.82□□□□□ -1.48
BPIFA3Q9BQP9 AC103703.1-201ENST00000634783 663 ntBASIC5.82□□□□□ -1.48
BPIFA3Q9BQP9 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
BPIFA3Q9BQP9 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
BPIFA3Q9BQP9 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
BPIFA3Q9BQP9 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
BPIFA3Q9BQP9 TCP1P3-201ENST00000414406 1498 ntBASIC5.82□□□□□ -1.48
BPIFA3Q9BQP9 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
BPIFA3Q9BQP9 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
BPIFA3Q9BQP9 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
BPIFA3Q9BQP9 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.81□□□□□ -1.48
BPIFA3Q9BQP9 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.81□□□□□ -1.48
BPIFA3Q9BQP9 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
BPIFA3Q9BQP9 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
BPIFA3Q9BQP9 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
BPIFA3Q9BQP9 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
BPIFA3Q9BQP9 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
BPIFA3Q9BQP9 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
BPIFA3Q9BQP9 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
BPIFA3Q9BQP9 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
BPIFA3Q9BQP9 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
BPIFA3Q9BQP9 AL390316.1-201ENST00000406279 553 ntBASIC5.81□□□□□ -1.48
BPIFA3Q9BQP9 Z93019.1-201ENST00000416450 973 ntBASIC5.81□□□□□ -1.48
BPIFA3Q9BQP9 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC5.81□□□□□ -1.48
BPIFA3Q9BQP9 GNG5P5-201ENST00000420444 220 ntBASIC5.81□□□□□ -1.48
BPIFA3Q9BQP9 RPL34P6-201ENST00000432390 345 ntBASIC5.81□□□□□ -1.48
BPIFA3Q9BQP9 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.81□□□□□ -1.48
BPIFA3Q9BQP9 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.81□□□□□ -1.48
BPIFA3Q9BQP9 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.81□□□□□ -1.48
BPIFA3Q9BQP9 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.81□□□□□ -1.48
BPIFA3Q9BQP9 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.81□□□□□ -1.48
BPIFA3Q9BQP9 HNRNPRP2-201ENST00000528421 743 ntBASIC5.81□□□□□ -1.48
BPIFA3Q9BQP9 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
BPIFA3Q9BQP9 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC5.81□□□□□ -1.48
BPIFA3Q9BQP9 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.81□□□□□ -1.48
BPIFA3Q9BQP9 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
BPIFA3Q9BQP9 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.81□□□□□ -1.48
BPIFA3Q9BQP9 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.81□□□□□ -1.48
BPIFA3Q9BQP9 AC037198.3-201ENST00000616754 526 ntBASIC5.81□□□□□ -1.48
BPIFA3Q9BQP9 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.81□□□□□ -1.48
BPIFA3Q9BQP9 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
BPIFA3Q9BQP9 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
BPIFA3Q9BQP9 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.81□□□□□ -1.48
BPIFA3Q9BQP9 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.81□□□□□ -1.48
BPIFA3Q9BQP9 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.81□□□□□ -1.48
BPIFA3Q9BQP9 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
BPIFA3Q9BQP9 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
BPIFA3Q9BQP9 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.8□□□□□ -1.48
BPIFA3Q9BQP9 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
BPIFA3Q9BQP9 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.8□□□□□ -1.48
BPIFA3Q9BQP9 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
BPIFA3Q9BQP9 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
BPIFA3Q9BQP9 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.8□□□□□ -1.48
BPIFA3Q9BQP9 RNA5SP46-201ENST00000362370 120 ntBASIC5.8□□□□□ -1.48
BPIFA3Q9BQP9 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
BPIFA3Q9BQP9 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
BPIFA3Q9BQP9 OR4K12P-201ENST00000406538 961 ntBASIC5.8□□□□□ -1.48
BPIFA3Q9BQP9 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.8□□□□□ -1.48
BPIFA3Q9BQP9 AC110602.1-201ENST00000437414 318 ntBASIC5.8□□□□□ -1.48
BPIFA3Q9BQP9 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.8□□□□□ -1.48
BPIFA3Q9BQP9 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.8□□□□□ -1.48
BPIFA3Q9BQP9 AC104634.1-201ENST00000452720 462 ntBASIC5.8□□□□□ -1.48
BPIFA3Q9BQP9 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.8□□□□□ -1.48
BPIFA3Q9BQP9 HLA-DPA3-207ENST00000454398 229 ntBASIC5.8□□□□□ -1.48
BPIFA3Q9BQP9 TPT1P1-201ENST00000458495 518 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms