Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC8.61□□□□□ -1.03
IFT140Q96RY7 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC8.61□□□□□ -1.03
IFT140Q96RY7 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
IFT140Q96RY7 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC8.61□□□□□ -1.03
IFT140Q96RY7 RPL23AP1-201ENST00000428990 471 ntBASIC8.61□□□□□ -1.03
IFT140Q96RY7 USP24P1-201ENST00000433802 779 ntBASIC8.61□□□□□ -1.03
IFT140Q96RY7 FABP5P2-201ENST00000439042 408 ntBASIC8.61□□□□□ -1.03
IFT140Q96RY7 AC025674.1-201ENST00000507074 324 ntBASIC8.61□□□□□ -1.03
IFT140Q96RY7 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC8.61□□□□□ -1.03
IFT140Q96RY7 MORF4L1P3-201ENST00000525966 950 ntBASIC8.61□□□□□ -1.03
IFT140Q96RY7 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC8.61□□□□□ -1.03
IFT140Q96RY7 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC8.61□□□□□ -1.03
IFT140Q96RY7 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC8.61□□□□□ -1.03
IFT140Q96RY7 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC8.61□□□□□ -1.03
IFT140Q96RY7 AC144833.1-201ENST00000567953 4089 ntBASIC8.61□□□□□ -1.03
IFT140Q96RY7 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
IFT140Q96RY7 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
IFT140Q96RY7 AL449283.1-201ENST00000602631 3403 ntBASIC8.61□□□□□ -1.03
IFT140Q96RY7 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC8.61□□□□□ -1.03
IFT140Q96RY7 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
IFT140Q96RY7 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC8.6□□□□□ -1.03
IFT140Q96RY7 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
IFT140Q96RY7 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
IFT140Q96RY7 OR4K15-201ENST00000305051 1216 ntBASIC8.6□□□□□ -1.03
IFT140Q96RY7 RNU4-39P-201ENST00000362455 127 ntBASIC8.6□□□□□ -1.03
IFT140Q96RY7 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
IFT140Q96RY7 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC8.6□□□□□ -1.03
IFT140Q96RY7 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC8.6□□□□□ -1.03
IFT140Q96RY7 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC8.6□□□□□ -1.03
IFT140Q96RY7 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC8.6□□□□□ -1.03
IFT140Q96RY7 AURKAPS2-201ENST00000454983 333 ntBASIC8.6□□□□□ -1.03
IFT140Q96RY7 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
IFT140Q96RY7 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC8.6□□□□□ -1.03
IFT140Q96RY7 FGB-207ENST00000509493 1164 ntTSL 5 BASIC8.6□□□□□ -1.03
IFT140Q96RY7 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC8.6□□□□□ -1.03
IFT140Q96RY7 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
IFT140Q96RY7 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC8.6□□□□□ -1.03
IFT140Q96RY7 AL121873.1-201ENST00000616013 524 ntBASIC8.6□□□□□ -1.03
IFT140Q96RY7 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
IFT140Q96RY7 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC8.6□□□□□ -1.03
IFT140Q96RY7 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC8.6□□□□□ -1.03
IFT140Q96RY7 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
IFT140Q96RY7 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
IFT140Q96RY7 HYDIN2-203ENST00000614586 13885 ntBASIC8.6□□□□□ -1.03
IFT140Q96RY7 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
IFT140Q96RY7 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
IFT140Q96RY7 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC8.59□□□□□ -1.03
IFT140Q96RY7 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC8.59□□□□□ -1.03
IFT140Q96RY7 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC8.59□□□□□ -1.03
IFT140Q96RY7 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.03
IFT140Q96RY7 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.03
IFT140Q96RY7 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
IFT140Q96RY7 U3.22-201ENST00000391120 215 ntBASIC8.59□□□□□ -1.03
IFT140Q96RY7 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC8.59□□□□□ -1.03
IFT140Q96RY7 RPL21P129-201ENST00000491732 478 ntBASIC8.59□□□□□ -1.03
IFT140Q96RY7 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC8.59□□□□□ -1.03
IFT140Q96RY7 GLUD1P3-202ENST00000508551 200 ntBASIC8.59□□□□□ -1.03
IFT140Q96RY7 AL109766.1-201ENST00000555080 552 ntBASIC8.59□□□□□ -1.03
IFT140Q96RY7 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC8.59□□□□□ -1.03
IFT140Q96RY7 AC009027.1-201ENST00000604510 479 ntBASIC8.59□□□□□ -1.03
IFT140Q96RY7 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC8.59□□□□□ -1.03
IFT140Q96RY7 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
IFT140Q96RY7 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
IFT140Q96RY7 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC8.59□□□□□ -1.03
IFT140Q96RY7 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC8.59□□□□□ -1.03
IFT140Q96RY7 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC8.59□□□□□ -1.03
IFT140Q96RY7 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC8.59□□□□□ -1.03
IFT140Q96RY7 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
IFT140Q96RY7 PABPC1P8-201ENST00000452851 2086 ntBASIC8.59□□□□□ -1.03
IFT140Q96RY7 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
IFT140Q96RY7 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
IFT140Q96RY7 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
IFT140Q96RY7 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
IFT140Q96RY7 MIR298-201ENST00000401212 88 ntBASIC8.58□□□□□ -1.04
IFT140Q96RY7 TXNP5-201ENST00000441043 315 ntBASIC8.58□□□□□ -1.04
IFT140Q96RY7 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC8.58□□□□□ -1.04
IFT140Q96RY7 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC8.58□□□□□ -1.04
IFT140Q96RY7 AC244107.2-201ENST00000611773 76 ntBASIC8.58□□□□□ -1.04
IFT140Q96RY7 AL138960.1-201ENST00000613838 513 ntBASIC8.58□□□□□ -1.04
IFT140Q96RY7 AP001885.1-201ENST00000621658 558 ntBASIC8.58□□□□□ -1.04
IFT140Q96RY7 AP003400.3-201ENST00000624904 346 ntBASIC8.58□□□□□ -1.04
IFT140Q96RY7 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC8.58□□□□□ -1.04
IFT140Q96RY7 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC8.58□□□□□ -1.04
IFT140Q96RY7 AC063976.2-201ENST00000425667 3556 ntBASIC8.58□□□□□ -1.04
IFT140Q96RY7 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC8.58□□□□□ -1.04
IFT140Q96RY7 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
IFT140Q96RY7 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC8.58□□□□□ -1.04
IFT140Q96RY7 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC8.58□□□□□ -1.04
IFT140Q96RY7 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
IFT140Q96RY7 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC8.58□□□□□ -1.04
IFT140Q96RY7 AC009951.1-201ENST00000623674 2614 ntBASIC8.58□□□□□ -1.04
IFT140Q96RY7 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
IFT140Q96RY7 RAD17P2-201ENST00000451754 1977 ntBASIC8.58□□□□□ -1.04
IFT140Q96RY7 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC8.58□□□□□ -1.04
IFT140Q96RY7 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
IFT140Q96RY7 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
IFT140Q96RY7 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC8.58□□□□□ -1.04
IFT140Q96RY7 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC8.58□□□□□ -1.04
IFT140Q96RY7 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
IFT140Q96RY7 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms