Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.6□□□□□ -1.51
VMP1Q96GC9 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VMP1Q96GC9 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VMP1Q96GC9 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.6□□□□□ -1.51
VMP1Q96GC9 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.6□□□□□ -1.51
VMP1Q96GC9 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VMP1Q96GC9 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.59□□□□□ -1.51
VMP1Q96GC9 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VMP1Q96GC9 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VMP1Q96GC9 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VMP1Q96GC9 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VMP1Q96GC9 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VMP1Q96GC9 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.59□□□□□ -1.51
VMP1Q96GC9 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VMP1Q96GC9 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VMP1Q96GC9 CASC19-221ENST00000641309 1382 ntBASIC5.59□□□□□ -1.51
VMP1Q96GC9 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VMP1Q96GC9 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VMP1Q96GC9 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
VMP1Q96GC9 RNFT1P3-201ENST00000340898 1052 ntBASIC5.59□□□□□ -1.51
VMP1Q96GC9 AC023490.2-201ENST00000359859 470 ntBASIC5.59□□□□□ -1.51
VMP1Q96GC9 RN7SKP69-201ENST00000365390 305 ntBASIC5.59□□□□□ -1.51
VMP1Q96GC9 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
VMP1Q96GC9 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
VMP1Q96GC9 RNA5SP187-201ENST00000384400 119 ntBASIC5.59□□□□□ -1.51
VMP1Q96GC9 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
VMP1Q96GC9 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.59□□□□□ -1.51
VMP1Q96GC9 SNRPEP6-201ENST00000407465 277 ntBASIC5.59□□□□□ -1.51
VMP1Q96GC9 RNU2-50P-201ENST00000410494 143 ntBASIC5.59□□□□□ -1.51
VMP1Q96GC9 NPM1P40-201ENST00000412758 733 ntBASIC5.59□□□□□ -1.51
VMP1Q96GC9 PTCD2P2-201ENST00000415579 1095 ntBASIC5.59□□□□□ -1.51
VMP1Q96GC9 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.59□□□□□ -1.51
VMP1Q96GC9 AC066692.1-201ENST00000421721 457 ntBASIC5.59□□□□□ -1.51
VMP1Q96GC9 AL136231.1-201ENST00000429407 730 ntBASIC5.59□□□□□ -1.51
VMP1Q96GC9 NDUFA5P1-201ENST00000433858 341 ntBASIC5.59□□□□□ -1.51
VMP1Q96GC9 MTND2P40-201ENST00000436718 841 ntBASIC5.59□□□□□ -1.51
VMP1Q96GC9 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.59□□□□□ -1.51
VMP1Q96GC9 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.59□□□□□ -1.51
VMP1Q96GC9 AL606490.8-201ENST00000441624 319 ntBASIC5.59□□□□□ -1.51
VMP1Q96GC9 ACA64.1-201ENST00000459171 127 ntBASIC5.59□□□□□ -1.51
VMP1Q96GC9 AC023245.1-201ENST00000468501 517 ntBASIC5.59□□□□□ -1.51
VMP1Q96GC9 OR5H7P-201ENST00000514084 930 ntBASIC5.59□□□□□ -1.51
VMP1Q96GC9 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.59□□□□□ -1.51
VMP1Q96GC9 RNU6-491P-201ENST00000516099 110 ntBASIC5.59□□□□□ -1.51
VMP1Q96GC9 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.59□□□□□ -1.51
VMP1Q96GC9 WBP1LP3-201ENST00000523033 208 ntBASIC5.59□□□□□ -1.51
VMP1Q96GC9 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.59□□□□□ -1.51
VMP1Q96GC9 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.59□□□□□ -1.51
VMP1Q96GC9 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.59□□□□□ -1.51
VMP1Q96GC9 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.59□□□□□ -1.51
VMP1Q96GC9 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.59□□□□□ -1.51
VMP1Q96GC9 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.59□□□□□ -1.51
VMP1Q96GC9 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.59□□□□□ -1.51
VMP1Q96GC9 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.59□□□□□ -1.51
VMP1Q96GC9 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.59□□□□□ -1.51
VMP1Q96GC9 AL136131.3-201ENST00000607600 188 ntBASIC5.59□□□□□ -1.51
VMP1Q96GC9 AC026367.3-201ENST00000619032 590 ntBASIC5.59□□□□□ -1.51
VMP1Q96GC9 FO681491.1-202ENST00000623392 737 ntBASIC5.59□□□□□ -1.51
VMP1Q96GC9 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
VMP1Q96GC9 BX005019.1-201ENST00000561881 1810 ntBASIC5.59□□□□□ -1.51
VMP1Q96GC9 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
VMP1Q96GC9 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
VMP1Q96GC9 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.59□□□□□ -1.52
VMP1Q96GC9 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
VMP1Q96GC9 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
VMP1Q96GC9 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
VMP1Q96GC9 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
VMP1Q96GC9 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VMP1Q96GC9 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.58□□□□□ -1.52
VMP1Q96GC9 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VMP1Q96GC9 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.58□□□□□ -1.52
VMP1Q96GC9 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VMP1Q96GC9 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.58□□□□□ -1.52
VMP1Q96GC9 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.58□□□□□ -1.52
VMP1Q96GC9 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VMP1Q96GC9 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VMP1Q96GC9 FBXL21-201ENST00000297158 1305 ntBASIC5.58□□□□□ -1.52
VMP1Q96GC9 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VMP1Q96GC9 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
VMP1Q96GC9 RNA5SP477-201ENST00000362639 119 ntBASIC5.58□□□□□ -1.52
VMP1Q96GC9 AL512430.2-201ENST00000406786 339 ntBASIC5.58□□□□□ -1.52
VMP1Q96GC9 HMGN1P20-201ENST00000411849 300 ntBASIC5.58□□□□□ -1.52
VMP1Q96GC9 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.58□□□□□ -1.52
VMP1Q96GC9 METTL15P3-201ENST00000415522 1221 ntBASIC5.58□□□□□ -1.52
VMP1Q96GC9 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.58□□□□□ -1.52
VMP1Q96GC9 AC138761.5-201ENST00000433967 325 ntBASIC5.58□□□□□ -1.52
VMP1Q96GC9 MTND6P18-201ENST00000439477 513 ntBASIC5.58□□□□□ -1.52
VMP1Q96GC9 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.58□□□□□ -1.52
VMP1Q96GC9 Z99127.2-201ENST00000441426 334 ntBASIC5.58□□□□□ -1.52
VMP1Q96GC9 CLIC4P1-201ENST00000453177 535 ntBASIC5.58□□□□□ -1.52
VMP1Q96GC9 AL354710.1-201ENST00000453641 246 ntBASIC5.58□□□□□ -1.52
VMP1Q96GC9 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.58□□□□□ -1.52
VMP1Q96GC9 RNU6-775P-201ENST00000459318 96 ntBASIC5.58□□□□□ -1.52
VMP1Q96GC9 AC104164.1-201ENST00000460282 590 ntBASIC5.58□□□□□ -1.52
VMP1Q96GC9 AP000942.1-201ENST00000463969 747 ntBASIC5.58□□□□□ -1.52
VMP1Q96GC9 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.58□□□□□ -1.52
VMP1Q96GC9 AC124945.1-201ENST00000485133 188 ntBASIC5.58□□□□□ -1.52
VMP1Q96GC9 CCDC11P1-201ENST00000503137 1162 ntBASIC5.58□□□□□ -1.52
VMP1Q96GC9 AC021146.7-201ENST00000509604 775 ntBASIC5.58□□□□□ -1.52
VMP1Q96GC9 TOMM22P4-201ENST00000511318 336 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms