Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
VBP1P61758 AC005522.1-201ENST00000395416 346 ntBASIC4.79□□□□□ -1.64
VBP1P61758 HMGB3P7-201ENST00000400214 611 ntBASIC4.79□□□□□ -1.64
VBP1P61758 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC4.79□□□□□ -1.64
VBP1P61758 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC4.79□□□□□ -1.64
VBP1P61758 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC4.79□□□□□ -1.64
VBP1P61758 AC128677.1-201ENST00000436016 442 ntBASIC4.79□□□□□ -1.64
VBP1P61758 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.79□□□□□ -1.64
VBP1P61758 AC019185.3-201ENST00000438805 323 ntBASIC4.79□□□□□ -1.64
VBP1P61758 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.79□□□□□ -1.64
VBP1P61758 PPIAP7-201ENST00000454070 489 ntBASIC4.79□□□□□ -1.64
VBP1P61758 HSPE1P22-201ENST00000456856 327 ntBASIC4.79□□□□□ -1.64
VBP1P61758 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC4.79□□□□□ -1.64
VBP1P61758 RN7SL447P-201ENST00000494711 245 ntBASIC4.79□□□□□ -1.64
VBP1P61758 AC117500.1-201ENST00000497352 755 ntBASIC4.79□□□□□ -1.64
VBP1P61758 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC4.79□□□□□ -1.64
VBP1P61758 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.79□□□□□ -1.64
VBP1P61758 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.79□□□□□ -1.64
VBP1P61758 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC4.79□□□□□ -1.64
VBP1P61758 AP000620.1-201ENST00000527147 504 ntBASIC4.79□□□□□ -1.64
VBP1P61758 RN7SL32P-201ENST00000580514 281 ntBASIC4.79□□□□□ -1.64
VBP1P61758 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC4.79□□□□□ -1.64
VBP1P61758 AC092681.3-201ENST00000609463 678 ntBASIC4.79□□□□□ -1.64
VBP1P61758 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC4.79□□□□□ -1.64
VBP1P61758 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC4.79□□□□□ -1.64
VBP1P61758 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC4.79□□□□□ -1.64
VBP1P61758 AL136228.1-201ENST00000622221 319 ntBASIC4.79□□□□□ -1.64
VBP1P61758 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.79□□□□□ -1.64
VBP1P61758 ASB8-218ENST00000629941 278 ntTSL 5 BASIC4.79□□□□□ -1.64
VBP1P61758 AC129915.3-201ENST00000634128 948 ntBASIC4.79□□□□□ -1.64
VBP1P61758 CASC19-222ENST00000641321 1173 ntBASIC4.79□□□□□ -1.64
VBP1P61758 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
VBP1P61758 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VBP1P61758 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.79□□□□□ -1.64
VBP1P61758 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.79□□□□□ -1.64
VBP1P61758 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.79□□□□□ -1.64
VBP1P61758 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
VBP1P61758 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC4.79□□□□□ -1.64
VBP1P61758 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VBP1P61758 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC4.78□□□□□ -1.64
VBP1P61758 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
VBP1P61758 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
VBP1P61758 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VBP1P61758 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VBP1P61758 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VBP1P61758 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VBP1P61758 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VBP1P61758 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VBP1P61758 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VBP1P61758 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC4.78□□□□□ -1.64
VBP1P61758 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.78□□□□□ -1.64
VBP1P61758 AC124944.2-201ENST00000429866 1242 ntBASIC4.78□□□□□ -1.64
VBP1P61758 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.78□□□□□ -1.64
VBP1P61758 AL353662.1-201ENST00000439099 327 ntBASIC4.78□□□□□ -1.64
VBP1P61758 NPM1P9-201ENST00000453156 844 ntBASIC4.78□□□□□ -1.64
VBP1P61758 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.78□□□□□ -1.64
VBP1P61758 RPL5P30-201ENST00000465511 891 ntBASIC4.78□□□□□ -1.64
VBP1P61758 AC009120.1-201ENST00000493458 473 ntBASIC4.78□□□□□ -1.64
VBP1P61758 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.78□□□□□ -1.64
VBP1P61758 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC4.78□□□□□ -1.64
VBP1P61758 RNA5SP464-201ENST00000516251 108 ntBASIC4.78□□□□□ -1.64
VBP1P61758 Vault.2-201ENST00000516519 98 ntBASIC4.78□□□□□ -1.64
VBP1P61758 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC4.78□□□□□ -1.64
VBP1P61758 AP002981.1-201ENST00000517692 975 ntBASIC4.78□□□□□ -1.64
VBP1P61758 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC4.78□□□□□ -1.64
VBP1P61758 DUX4L52-201ENST00000549363 777 ntBASIC4.78□□□□□ -1.64
VBP1P61758 AC007346.1-201ENST00000569208 867 ntBASIC4.78□□□□□ -1.64
VBP1P61758 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VBP1P61758 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC4.78□□□□□ -1.64
VBP1P61758 AP005403.1-201ENST00000579720 229 ntBASIC4.78□□□□□ -1.64
VBP1P61758 AL353807.4-201ENST00000604995 257 ntBASIC4.78□□□□□ -1.64
VBP1P61758 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC4.78□□□□□ -1.64
VBP1P61758 AL136131.3-201ENST00000607600 188 ntBASIC4.78□□□□□ -1.64
VBP1P61758 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.78□□□□□ -1.64
VBP1P61758 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC4.78□□□□□ -1.64
VBP1P61758 AL158062.1-201ENST00000619632 745 ntBASIC4.78□□□□□ -1.64
VBP1P61758 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.78□□□□□ -1.64
VBP1P61758 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VBP1P61758 SCN1A-220ENST00000641603 12506 ntBASIC4.78□□□□□ -1.64
VBP1P61758 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VBP1P61758 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
VBP1P61758 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.78□□□□□ -1.64
VBP1P61758 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
VBP1P61758 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VBP1P61758 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
VBP1P61758 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
VBP1P61758 AC217777.1-201ENST00000570034 1471 ntBASIC4.77□□□□□ -1.65
VBP1P61758 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.77□□□□□ -1.65
VBP1P61758 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VBP1P61758 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC4.77□□□□□ -1.65
VBP1P61758 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.77□□□□□ -1.65
VBP1P61758 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VBP1P61758 RPL35AP21-201ENST00000437667 333 ntBASIC4.77□□□□□ -1.65
VBP1P61758 ARMC4P1-201ENST00000438905 707 ntBASIC4.77□□□□□ -1.65
VBP1P61758 HMGN1P32-201ENST00000441744 256 ntBASIC4.77□□□□□ -1.65
VBP1P61758 AC073109.1-201ENST00000445066 978 ntBASIC4.77□□□□□ -1.65
VBP1P61758 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.77□□□□□ -1.65
VBP1P61758 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC4.77□□□□□ -1.65
VBP1P61758 RN7SL814P-201ENST00000487715 300 ntBASIC4.77□□□□□ -1.65
VBP1P61758 AGGF1P3-201ENST00000493675 1213 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms