Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 SNORA70C-201ENST00000384538 135 ntBASIC5.56□□□□□ -1.52
HTTP42858 MIR670-201ENST00000390142 98 ntBASIC5.56□□□□□ -1.52
HTTP42858 ATP5F1P2-201ENST00000398143 760 ntBASIC5.56□□□□□ -1.52
HTTP42858 SLC25A14P1-201ENST00000502867 901 ntBASIC5.56□□□□□ -1.52
HTTP42858 GLUD1P3-202ENST00000508551 200 ntBASIC5.56□□□□□ -1.52
HTTP42858 MTCO1P35-201ENST00000515270 228 ntBASIC5.56□□□□□ -1.52
HTTP42858 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.56□□□□□ -1.52
HTTP42858 MIR3138-201ENST00000585238 82 ntBASIC5.56□□□□□ -1.52
HTTP42858 AC009027.1-201ENST00000604510 479 ntBASIC5.56□□□□□ -1.52
HTTP42858 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
HTTP42858 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HTTP42858 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.56□□□□□ -1.52
HTTP42858 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HTTP42858 ATP2B2-201ENST00000352432 8593 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HTTP42858 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
HTTP42858 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.56□□□□□ -1.52
HTTP42858 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
HTTP42858 AC079298.1-201ENST00000625026 1619 ntBASIC5.56□□□□□ -1.52
HTTP42858 AC108751.3-201ENST00000461814 1020 ntBASIC5.56□□□□□ -1.52
HTTP42858 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HTTP42858 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC5.56□□□□□ -1.52
HTTP42858 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.56□□□□□ -1.52
HTTP42858 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HTTP42858 HRNR-201ENST00000368801 9623 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HTTP42858 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HTTP42858 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
HTTP42858 AL031651.1-201ENST00000615357 1438 ntBASIC5.56□□□□□ -1.52
HTTP42858 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
HTTP42858 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HTTP42858 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.55□□□□□ -1.52
HTTP42858 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
HTTP42858 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
HTTP42858 ATP5HP3-201ENST00000396994 486 ntBASIC5.55□□□□□ -1.52
HTTP42858 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.55□□□□□ -1.52
HTTP42858 RPL34P27-201ENST00000428810 349 ntBASIC5.55□□□□□ -1.52
HTTP42858 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.55□□□□□ -1.52
HTTP42858 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC5.55□□□□□ -1.52
HTTP42858 AC108738.1-201ENST00000603703 237 ntBASIC5.55□□□□□ -1.52
HTTP42858 AC087821.1-201ENST00000623639 567 ntBASIC5.55□□□□□ -1.52
HTTP42858 CASC22-202ENST00000628396 802 ntTSL 5 BASIC5.55□□□□□ -1.52
HTTP42858 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HTTP42858 PLCXD2-205ENST00000636933 7710 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
HTTP42858 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
HTTP42858 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.55□□□□□ -1.52
HTTP42858 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HTTP42858 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HTTP42858 VCAN-208ENST00000512590 5923 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HTTP42858 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.55□□□□□ -1.52
HTTP42858 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
HTTP42858 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HTTP42858 ZNF462-204ENST00000441147 4691 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HTTP42858 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HTTP42858 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HTTP42858 RNA5SP509-201ENST00000364577 119 ntBASIC5.55□□□□□ -1.52
HTTP42858 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
HTTP42858 MAP1A-202ENST00000382031 10553 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
HTTP42858 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
HTTP42858 RPL34P6-201ENST00000432390 345 ntBASIC5.55□□□□□ -1.52
HTTP42858 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
HTTP42858 MIR4298-201ENST00000584380 73 ntBASIC5.55□□□□□ -1.52
HTTP42858 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.55□□□□□ -1.52
HTTP42858 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.55□□□□□ -1.52
HTTP42858 AL445567.2-201ENST00000618935 498 ntBASIC5.55□□□□□ -1.52
HTTP42858 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HTTP42858 ROBO2-201ENST00000332191 5437 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
HTTP42858 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.55□□□□□ -1.52
HTTP42858 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.55□□□□□ -1.52
HTTP42858 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HTTP42858 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.55□□□□□ -1.52
HTTP42858 ADAMTS4-202ENST00000367996 9773 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HTTP42858 WBP11P1-201ENST00000562560 1931 ntBASIC5.55□□□□□ -1.52
HTTP42858 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
HTTP42858 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HTTP42858 CRIP1P1-201ENST00000427567 185 ntBASIC5.54□□□□□ -1.52
HTTP42858 YWHAZP2-201ENST00000440317 728 ntBASIC5.54□□□□□ -1.52
HTTP42858 HMGB1P4-201ENST00000455362 567 ntBASIC5.54□□□□□ -1.52
HTTP42858 RPL7P40-201ENST00000481703 745 ntBASIC5.54□□□□□ -1.52
HTTP42858 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC5.54□□□□□ -1.52
HTTP42858 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.54□□□□□ -1.52
HTTP42858 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.54□□□□□ -1.52
HTTP42858 NAV2-213ENST00000533917 5084 ntTSL 2 BASIC5.54□□□□□ -1.52
HTTP42858 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.54□□□□□ -1.52
HTTP42858 HSPD1P8-201ENST00000400121 1658 ntBASIC5.54□□□□□ -1.52
HTTP42858 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HTTP42858 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HTTP42858 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.54□□□□□ -1.52
HTTP42858 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HTTP42858 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
HTTP42858 SNHG14-210ENST00000546682 8842 ntTSL 5 BASIC5.54□□□□□ -1.52
HTTP42858 SNORD1C-201ENST00000363315 78 ntBASIC5.54□□□□□ -1.52
HTTP42858 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
HTTP42858 PPIAP9-201ENST00000403866 498 ntBASIC5.54□□□□□ -1.52
HTTP42858 GAPDHP62-201ENST00000515313 990 ntBASIC5.54□□□□□ -1.52
HTTP42858 RNU2-30P-201ENST00000516209 141 ntBASIC5.54□□□□□ -1.52
HTTP42858 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.54□□□□□ -1.52
HTTP42858 BCOR-201ENST00000342274 6390 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
HTTP42858 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
HTTP42858 PARN-201ENST00000341484 2100 ntTSL 2 BASIC5.54□□□□□ -1.52
HTTP42858 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.54□□□□□ -1.52
HTTP42858 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms