Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
PTPREP23469 CDY7P-201ENST00000429883 1604 ntBASIC8.8□□□□□ -1
PTPREP23469 ATP5A1P10-201ENST00000622403 1603 ntBASIC8.8□□□□□ -1
PTPREP23469 AC010928.1-201ENST00000592477 1447 ntBASIC8.8□□□□□ -1
PTPREP23469 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC8.8□□□□□ -1
PTPREP23469 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
PTPREP23469 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
PTPREP23469 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC8.79□□□□□ -1
PTPREP23469 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
PTPREP23469 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC8.79□□□□□ -1
PTPREP23469 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
PTPREP23469 RLIMP2-201ENST00000427891 1563 ntBASIC8.79□□□□□ -1
PTPREP23469 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC8.79□□□□□ -1
PTPREP23469 ALB-203ENST00000415165 1483 ntTSL 1 (best) BASIC8.79□□□□□ -1
PTPREP23469 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
PTPREP23469 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
PTPREP23469 ORM1-201ENST00000259396 802 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
PTPREP23469 RNA5SP396-201ENST00000364834 120 ntBASIC8.79□□□□□ -1
PTPREP23469 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
PTPREP23469 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC8.79□□□□□ -1
PTPREP23469 SNORA10B-201ENST00000384458 133 ntBASIC8.79□□□□□ -1
PTPREP23469 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
PTPREP23469 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
PTPREP23469 AL139128.1-201ENST00000413921 941 ntBASIC8.79□□□□□ -1
PTPREP23469 PPIAP30-201ENST00000415473 519 ntBASIC8.79□□□□□ -1
PTPREP23469 RPL5P34-201ENST00000426545 891 ntBASIC8.79□□□□□ -1
PTPREP23469 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC8.79□□□□□ -1
PTPREP23469 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC8.79□□□□□ -1
PTPREP23469 AC079448.1-201ENST00000449377 373 ntBASIC8.79□□□□□ -1
PTPREP23469 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC8.79□□□□□ -1
PTPREP23469 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC8.79□□□□□ -1
PTPREP23469 AC107398.1-201ENST00000486904 505 ntBASIC8.79□□□□□ -1
PTPREP23469 SUMO2P17-201ENST00000504438 285 ntBASIC8.79□□□□□ -1
PTPREP23469 HSPE1P10-201ENST00000508631 558 ntBASIC8.79□□□□□ -1
PTPREP23469 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC8.79□□□□□ -1
PTPREP23469 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC8.79□□□□□ -1
PTPREP23469 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC8.79□□□□□ -1
PTPREP23469 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC8.79□□□□□ -1
PTPREP23469 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC8.79□□□□□ -1
PTPREP23469 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC8.79□□□□□ -1
PTPREP23469 AC026464.1-202ENST00000564737 722 ntAPPRIS P5 TSL 5 BASIC8.79□□□□□ -1
PTPREP23469 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC8.79□□□□□ -1
PTPREP23469 UBE2L4-201ENST00000587688 464 ntBASIC8.79□□□□□ -1
PTPREP23469 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC8.79□□□□□ -1
PTPREP23469 AC112191.3-201ENST00000604371 277 ntBASIC8.79□□□□□ -1
PTPREP23469 AC012603.1-201ENST00000606424 528 ntBASIC8.79□□□□□ -1
PTPREP23469 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC8.79□□□□□ -1
PTPREP23469 CR392039.3-201ENST00000623236 227 ntTSL 5 BASIC8.79□□□□□ -1
PTPREP23469 AC091905.1-201ENST00000624400 311 ntBASIC8.79□□□□□ -1
PTPREP23469 AC110994.2-201ENST00000635481 492 ntBASIC8.79□□□□□ -1
PTPREP23469 MTND4LP32-201ENST00000636111 270 ntBASIC8.79□□□□□ -1
PTPREP23469 U2.22-201ENST00000636441 106 ntBASIC8.79□□□□□ -1
PTPREP23469 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
PTPREP23469 PRKAR2A-AS1-202ENST00000416209 3447 ntTSL 2 BASIC8.79□□□□□ -1
PTPREP23469 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC8.79□□□□□ -1
PTPREP23469 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC8.79□□□□□ -1
PTPREP23469 LINC01138-210ENST00000640832 1709 ntTSL 5 BASIC8.79□□□□□ -1
PTPREP23469 KIAA0753-201ENST00000361413 4859 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
PTPREP23469 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
PTPREP23469 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC8.79□□□□□ -1
PTPREP23469 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
PTPREP23469 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
PTPREP23469 KYNUP1-201ENST00000466683 1406 ntBASIC8.79□□□□□ -1
PTPREP23469 CDY2B-201ENST00000382867 1961 ntAPPRIS ALT1 BASIC8.79□□□□□ -1
PTPREP23469 AL031985.3-201ENST00000565390 2449 ntBASIC8.79□□□□□ -1
PTPREP23469 Z99129.4-201ENST00000624649 2435 ntBASIC8.79□□□□□ -1
PTPREP23469 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
PTPREP23469 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC8.78□□□□□ -1
PTPREP23469 AL353898.3-201ENST00000624679 1755 ntBASIC8.78□□□□□ -1
PTPREP23469 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC8.78□□□□□ -1
PTPREP23469 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC8.78□□□□□ -1
PTPREP23469 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
PTPREP23469 LINC02150-201ENST00000513157 2120 ntTSL 5 BASIC8.78□□□□□ -1
PTPREP23469 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
PTPREP23469 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC8.78□□□□□ -1
PTPREP23469 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC8.78□□□□□ -1
PTPREP23469 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC8.78□□□□□ -1
PTPREP23469 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC8.78□□□□□ -1
PTPREP23469 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC8.78□□□□□ -1
PTPREP23469 USP32P2-201ENST00000412260 4329 ntTSL 1 (best) BASIC8.78□□□□□ -1
PTPREP23469 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
PTPREP23469 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC8.78□□□□□ -1
PTPREP23469 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC8.78□□□□□ -1
PTPREP23469 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
PTPREP23469 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
PTPREP23469 CCT5-201ENST00000280326 3675 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
PTPREP23469 Y_RNA.188-201ENST00000363952 111 ntBASIC8.78□□□□□ -1
PTPREP23469 Y_RNA.259-201ENST00000364619 101 ntBASIC8.78□□□□□ -1
PTPREP23469 Y_RNA.481-201ENST00000384373 102 ntBASIC8.78□□□□□ -1
PTPREP23469 MIR142-201ENST00000384835 87 ntBASIC8.78□□□□□ -1
PTPREP23469 SNORA11D-201ENST00000408548 128 ntBASIC8.78□□□□□ -1
PTPREP23469 SNORA11E-201ENST00000408778 128 ntBASIC8.78□□□□□ -1
PTPREP23469 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC8.78□□□□□ -1
PTPREP23469 MTCO3P46-201ENST00000425787 232 ntBASIC8.78□□□□□ -1
PTPREP23469 AC023274.2-201ENST00000445264 521 ntBASIC8.78□□□□□ -1
PTPREP23469 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC8.78□□□□□ -1
PTPREP23469 PTMAP1-205ENST00000455552 325 ntBASIC8.78□□□□□ -1
PTPREP23469 CHIAP1-201ENST00000456220 995 ntBASIC8.78□□□□□ -1
PTPREP23469 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC8.78□□□□□ -1
PTPREP23469 HMGN2P25-201ENST00000486956 268 ntBASIC8.78□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms