Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AL451074.4-201ENST00000447545 470 ntBASIC6.92□□□□□ -1.3
PDGFAP04085 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC6.92□□□□□ -1.3
PDGFAP04085 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC6.92□□□□□ -1.3
PDGFAP04085 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC6.92□□□□□ -1.3
PDGFAP04085 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.92□□□□□ -1.3
PDGFAP04085 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.92□□□□□ -1.3
PDGFAP04085 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.92□□□□□ -1.3
PDGFAP04085 RPL23AP80-201ENST00000495605 424 ntBASIC6.92□□□□□ -1.3
PDGFAP04085 DUTP7-201ENST00000507982 486 ntBASIC6.92□□□□□ -1.3
PDGFAP04085 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC6.92□□□□□ -1.3
PDGFAP04085 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.92□□□□□ -1.3
PDGFAP04085 AC046134.1-201ENST00000514454 666 ntBASIC6.92□□□□□ -1.3
PDGFAP04085 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC6.92□□□□□ -1.3
PDGFAP04085 AP002748.2-201ENST00000528671 348 ntBASIC6.92□□□□□ -1.3
PDGFAP04085 AP004833.3-201ENST00000531893 322 ntBASIC6.92□□□□□ -1.3
PDGFAP04085 AP003032.2-201ENST00000533697 686 ntTSL 3 BASIC6.92□□□□□ -1.3
PDGFAP04085 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC6.92□□□□□ -1.3
PDGFAP04085 AC079598.4-201ENST00000549647 265 ntBASIC6.92□□□□□ -1.3
PDGFAP04085 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC6.92□□□□□ -1.3
PDGFAP04085 COX4I1P1-201ENST00000554239 509 ntBASIC6.92□□□□□ -1.3
PDGFAP04085 AC091932.1-201ENST00000569381 427 ntBASIC6.92□□□□□ -1.3
PDGFAP04085 AC068014.1-201ENST00000576836 413 ntTSL 3 BASIC6.92□□□□□ -1.3
PDGFAP04085 AC005730.3-201ENST00000583067 366 ntBASIC6.92□□□□□ -1.3
PDGFAP04085 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC6.92□□□□□ -1.3
PDGFAP04085 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC6.92□□□□□ -1.3
PDGFAP04085 RNU4-89P-201ENST00000607443 133 ntBASIC6.92□□□□□ -1.3
PDGFAP04085 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC6.92□□□□□ -1.3
PDGFAP04085 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC6.92□□□□□ -1.3
PDGFAP04085 MIR6889-201ENST00000613185 59 ntBASIC6.92□□□□□ -1.3
PDGFAP04085 AP000577.1-201ENST00000624366 878 ntBASIC6.92□□□□□ -1.3
PDGFAP04085 METAP1-212ENST00000625963 147 ntTSL 5 BASIC6.92□□□□□ -1.3
PDGFAP04085 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.92□□□□□ -1.3
PDGFAP04085 FAM157B-203ENST00000639350 358 ntBASIC6.92□□□□□ -1.3
PDGFAP04085 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
PDGFAP04085 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
PDGFAP04085 EIF4G3-201ENST00000264211 5802 ntAPPRIS P3 TSL 5 BASIC6.92□□□□□ -1.3
PDGFAP04085 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PDGFAP04085 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
PDGFAP04085 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PDGFAP04085 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PDGFAP04085 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PDGFAP04085 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC6.92□□□□□ -1.3
PDGFAP04085 NQO1-201ENST00000320623 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PDGFAP04085 MTND4P16-201ENST00000466108 1367 ntBASIC6.92□□□□□ -1.3
PDGFAP04085 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC6.92□□□□□ -1.3
PDGFAP04085 MAGEB18-201ENST00000325250 1811 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PDGFAP04085 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
PDGFAP04085 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
PDGFAP04085 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC6.91□□□□□ -1.3
PDGFAP04085 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PDGFAP04085 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
PDGFAP04085 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
PDGFAP04085 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PDGFAP04085 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC6.91□□□□□ -1.3
PDGFAP04085 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
PDGFAP04085 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PDGFAP04085 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC6.91□□□□□ -1.3
PDGFAP04085 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.91□□□□□ -1.3
PDGFAP04085 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
PDGFAP04085 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PDGFAP04085 MAGT1-205ENST00000618282 2788 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PDGFAP04085 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
PDGFAP04085 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
PDGFAP04085 PRLR-202ENST00000310101 1297 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PDGFAP04085 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
PDGFAP04085 Y_RNA.372-201ENST00000365599 102 ntBASIC6.91□□□□□ -1.3
PDGFAP04085 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.91□□□□□ -1.3
PDGFAP04085 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PDGFAP04085 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PDGFAP04085 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
PDGFAP04085 SSX6-201ENST00000376932 562 ntBASIC6.91□□□□□ -1.3
PDGFAP04085 RNU6-1122P-201ENST00000384449 107 ntBASIC6.91□□□□□ -1.3
PDGFAP04085 AC025750.1-201ENST00000399891 379 ntBASIC6.91□□□□□ -1.3
PDGFAP04085 NPM1P22-201ENST00000427761 952 ntBASIC6.91□□□□□ -1.3
PDGFAP04085 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.91□□□□□ -1.3
PDGFAP04085 AL022324.2-201ENST00000434827 780 ntBASIC6.91□□□□□ -1.3
PDGFAP04085 ANXA2P2-201ENST00000435128 1020 ntBASIC6.91□□□□□ -1.3
PDGFAP04085 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PDGFAP04085 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC6.91□□□□□ -1.3
PDGFAP04085 AC092809.1-201ENST00000441469 474 ntBASIC6.91□□□□□ -1.3
PDGFAP04085 AC004865.1-201ENST00000442276 1003 ntBASIC6.91□□□□□ -1.3
PDGFAP04085 AC124861.1-201ENST00000457178 429 ntTSL 5 BASIC6.91□□□□□ -1.3
PDGFAP04085 AC013267.1-201ENST00000458227 267 ntBASIC6.91□□□□□ -1.3
PDGFAP04085 DAP3-209ENST00000465375 729 ntTSL 2 BASIC6.91□□□□□ -1.3
PDGFAP04085 RN7SL836P-201ENST00000476140 296 ntBASIC6.91□□□□□ -1.3
PDGFAP04085 AC084878.1-201ENST00000480555 648 ntBASIC6.91□□□□□ -1.3
PDGFAP04085 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC6.91□□□□□ -1.3
PDGFAP04085 SSX8-201ENST00000506270 579 ntBASIC6.91□□□□□ -1.3
PDGFAP04085 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC6.91□□□□□ -1.3
PDGFAP04085 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC6.91□□□□□ -1.3
PDGFAP04085 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC6.91□□□□□ -1.3
PDGFAP04085 SCARNA11.1-201ENST00000516918 132 ntBASIC6.91□□□□□ -1.3
PDGFAP04085 OR6M2P-201ENST00000529831 871 ntBASIC6.91□□□□□ -1.3
PDGFAP04085 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC6.91□□□□□ -1.3
PDGFAP04085 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC6.91□□□□□ -1.3
PDGFAP04085 AC079313.2-201ENST00000550474 564 ntTSL 4 BASIC6.91□□□□□ -1.3
PDGFAP04085 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.91□□□□□ -1.3
PDGFAP04085 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.91□□□□□ -1.3
PDGFAP04085 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC6.91□□□□□ -1.3
PDGFAP04085 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms