Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC6.26□□□□□ -1.41
COL4A1P02462 AC000095.2-202ENST00000637415 154 ntBASIC6.26□□□□□ -1.41
COL4A1P02462 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.26□□□□□ -1.41
COL4A1P02462 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL4A1P02462 AL355488.2-201ENST00000609909 2850 ntBASIC6.26□□□□□ -1.41
COL4A1P02462 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL4A1P02462 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL4A1P02462 ERVFRD-3-201ENST00000578561 1617 ntBASIC6.25□□□□□ -1.41
COL4A1P02462 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL4A1P02462 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL4A1P02462 AL132640.2-201ENST00000559968 1698 ntBASIC6.25□□□□□ -1.41
COL4A1P02462 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL4A1P02462 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL4A1P02462 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
COL4A1P02462 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
COL4A1P02462 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL4A1P02462 AC079741.1-201ENST00000321498 212 ntBASIC6.25□□□□□ -1.41
COL4A1P02462 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC6.25□□□□□ -1.41
COL4A1P02462 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
COL4A1P02462 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.25□□□□□ -1.41
COL4A1P02462 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
COL4A1P02462 EIF1P5-201ENST00000585002 234 ntBASIC6.25□□□□□ -1.41
COL4A1P02462 ZNF652P1-201ENST00000442420 1309 ntBASIC6.25□□□□□ -1.41
COL4A1P02462 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.25□□□□□ -1.41
COL4A1P02462 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC6.25□□□□□ -1.41
COL4A1P02462 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.25□□□□□ -1.41
COL4A1P02462 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.25□□□□□ -1.41
COL4A1P02462 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL4A1P02462 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL4A1P02462 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
COL4A1P02462 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL4A1P02462 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC6.24□□□□□ -1.41
COL4A1P02462 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL4A1P02462 AC078842.2-201ENST00000447529 1835 ntTSL 2 BASIC6.24□□□□□ -1.41
COL4A1P02462 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.24□□□□□ -1.41
COL4A1P02462 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
COL4A1P02462 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL4A1P02462 SAMMSON-226ENST00000642089 1582 ntBASIC6.24□□□□□ -1.41
COL4A1P02462 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL4A1P02462 RN7SKP16-201ENST00000410180 299 ntBASIC6.24□□□□□ -1.41
COL4A1P02462 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC6.24□□□□□ -1.41
COL4A1P02462 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC6.24□□□□□ -1.41
COL4A1P02462 AL137845.2-201ENST00000444292 988 ntBASIC6.24□□□□□ -1.41
COL4A1P02462 AC000111.2-201ENST00000448200 210 ntBASIC6.24□□□□□ -1.41
COL4A1P02462 FTH1P2-201ENST00000466086 412 ntBASIC6.24□□□□□ -1.41
COL4A1P02462 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC6.24□□□□□ -1.41
COL4A1P02462 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6.24□□□□□ -1.41
COL4A1P02462 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.24□□□□□ -1.41
COL4A1P02462 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC6.24□□□□□ -1.41
COL4A1P02462 RPL27-207ENST00000590864 569 ntTSL 2 BASIC6.24□□□□□ -1.41
COL4A1P02462 AL391358.1-201ENST00000605342 190 ntBASIC6.24□□□□□ -1.41
COL4A1P02462 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC6.24□□□□□ -1.41
COL4A1P02462 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC6.24□□□□□ -1.41
COL4A1P02462 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL4A1P02462 AC079298.1-201ENST00000625026 1619 ntBASIC6.24□□□□□ -1.41
COL4A1P02462 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.24□□□□□ -1.41
COL4A1P02462 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL4A1P02462 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
COL4A1P02462 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL4A1P02462 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC6.24□□□□□ -1.41
COL4A1P02462 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL4A1P02462 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL4A1P02462 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC6.24□□□□□ -1.41
COL4A1P02462 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL4A1P02462 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.23□□□□□ -1.41
COL4A1P02462 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL4A1P02462 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL4A1P02462 SNORA2.3-201ENST00000383920 135 ntBASIC6.23□□□□□ -1.41
COL4A1P02462 RNA5SP332-201ENST00000391063 115 ntBASIC6.23□□□□□ -1.41
COL4A1P02462 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC6.23□□□□□ -1.41
COL4A1P02462 AC245028.1-201ENST00000423259 256 ntBASIC6.23□□□□□ -1.41
COL4A1P02462 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC6.23□□□□□ -1.41
COL4A1P02462 AC091390.1-201ENST00000433904 331 ntBASIC6.23□□□□□ -1.41
COL4A1P02462 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL4A1P02462 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC6.23□□□□□ -1.41
COL4A1P02462 OR52J1P-201ENST00000450596 932 ntBASIC6.23□□□□□ -1.41
COL4A1P02462 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC6.23□□□□□ -1.41
COL4A1P02462 RPL7P40-201ENST00000481703 745 ntBASIC6.23□□□□□ -1.41
COL4A1P02462 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC6.23□□□□□ -1.41
COL4A1P02462 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC6.23□□□□□ -1.41
COL4A1P02462 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC6.23□□□□□ -1.41
COL4A1P02462 RN7SL690P-201ENST00000582087 240 ntBASIC6.23□□□□□ -1.41
COL4A1P02462 MIR5096-201ENST00000583713 70 ntBASIC6.23□□□□□ -1.41
COL4A1P02462 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC6.23□□□□□ -1.41
COL4A1P02462 AC098935.2-201ENST00000604222 466 ntBASIC6.23□□□□□ -1.41
COL4A1P02462 AC104687.2-201ENST00000604442 342 ntBASIC6.23□□□□□ -1.41
COL4A1P02462 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC6.23□□□□□ -1.41
COL4A1P02462 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC6.23□□□□□ -1.41
COL4A1P02462 AC135068.12-201ENST00000637370 931 ntBASIC6.23□□□□□ -1.41
COL4A1P02462 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL4A1P02462 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL4A1P02462 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC6.23□□□□□ -1.41
COL4A1P02462 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL4A1P02462 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.23□□□□□ -1.41
COL4A1P02462 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL4A1P02462 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL4A1P02462 ZNF812P-201ENST00000457674 1694 ntBASIC6.23□□□□□ -1.41
COL4A1P02462 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL4A1P02462 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC6.23□□□□□ -1.41
COL4A1P02462 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms