Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC004014.2-201ENST00000623718 5122 ntBASIC7.15□□□□□ -1.26
SOX1O00570 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC7.15□□□□□ -1.26
SOX1O00570 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
SOX1O00570 IQCA1-206ENST00000431676 3069 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.26
SOX1O00570 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
SOX1O00570 SMG1P5-202ENST00000529428 4219 ntBASIC7.15□□□□□ -1.26
SOX1O00570 SMG1P2-201ENST00000566127 4221 ntBASIC7.15□□□□□ -1.26
SOX1O00570 CCDC62-203ENST00000392440 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
SOX1O00570 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC7.15□□□□□ -1.26
SOX1O00570 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SOX1O00570 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
SOX1O00570 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC7.15□□□□□ -1.26
SOX1O00570 SNORA75-201ENST00000384158 137 ntBASIC7.15□□□□□ -1.26
SOX1O00570 SMIM2-201ENST00000400419 822 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SOX1O00570 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC7.15□□□□□ -1.26
SOX1O00570 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC7.15□□□□□ -1.26
SOX1O00570 RPL36P1-201ENST00000419720 225 ntBASIC7.15□□□□□ -1.26
SOX1O00570 PAICSP7-201ENST00000419829 962 ntBASIC7.15□□□□□ -1.26
SOX1O00570 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
SOX1O00570 RPL21P43-201ENST00000425440 472 ntBASIC7.15□□□□□ -1.26
SOX1O00570 ARL6IP1P2-201ENST00000431356 563 ntBASIC7.15□□□□□ -1.26
SOX1O00570 UBE2V1P8-201ENST00000437166 265 ntBASIC7.15□□□□□ -1.26
SOX1O00570 AC064862.4-201ENST00000442180 334 ntBASIC7.15□□□□□ -1.26
SOX1O00570 HBG2-204ENST00000444587 307 ntTSL 2 BASIC7.15□□□□□ -1.26
SOX1O00570 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC7.15□□□□□ -1.26
SOX1O00570 TPT1P7-201ENST00000458300 517 ntBASIC7.15□□□□□ -1.26
SOX1O00570 RNU7-140P-201ENST00000459546 60 ntBASIC7.15□□□□□ -1.26
SOX1O00570 AC091959.2-201ENST00000477363 321 ntBASIC7.15□□□□□ -1.26
SOX1O00570 NCOR1P1-202ENST00000486162 291 ntBASIC7.15□□□□□ -1.26
SOX1O00570 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
SOX1O00570 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC7.15□□□□□ -1.26
SOX1O00570 RPL32P3-203ENST00000506593 498 ntTSL 5 BASIC7.15□□□□□ -1.26
SOX1O00570 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC7.15□□□□□ -1.26
SOX1O00570 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC7.15□□□□□ -1.26
SOX1O00570 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC7.15□□□□□ -1.26
SOX1O00570 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC7.15□□□□□ -1.26
SOX1O00570 OR52H2P-201ENST00000514607 902 ntBASIC7.15□□□□□ -1.26
SOX1O00570 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC7.15□□□□□ -1.26
SOX1O00570 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC7.15□□□□□ -1.26
SOX1O00570 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC7.15□□□□□ -1.26
SOX1O00570 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC7.15□□□□□ -1.26
SOX1O00570 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC7.15□□□□□ -1.26
SOX1O00570 NPM1P47-201ENST00000560843 856 ntBASIC7.15□□□□□ -1.26
SOX1O00570 AC092332.1-201ENST00000563684 829 ntBASIC7.15□□□□□ -1.26
SOX1O00570 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC7.15□□□□□ -1.26
SOX1O00570 MIR3912-201ENST00000577566 105 ntBASIC7.15□□□□□ -1.26
SOX1O00570 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SOX1O00570 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC7.15□□□□□ -1.26
SOX1O00570 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
SOX1O00570 AL355333.1-201ENST00000605632 279 ntBASIC7.15□□□□□ -1.26
SOX1O00570 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC7.15□□□□□ -1.26
SOX1O00570 AC092794.2-201ENST00000620933 563 ntBASIC7.15□□□□□ -1.26
SOX1O00570 AC015722.2-201ENST00000622210 551 ntBASIC7.15□□□□□ -1.26
SOX1O00570 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC7.15□□□□□ -1.26
SOX1O00570 PCMTD1P7-201ENST00000634506 357 ntBASIC7.15□□□□□ -1.26
SOX1O00570 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SOX1O00570 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC7.15□□□□□ -1.26
SOX1O00570 AC145138.1-201ENST00000512908 2851 ntBASIC7.15□□□□□ -1.27
SOX1O00570 LINC02099-202ENST00000522158 2980 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
SOX1O00570 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC7.15□□□□□ -1.27
SOX1O00570 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
SOX1O00570 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC7.15□□□□□ -1.27
SOX1O00570 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC7.15□□□□□ -1.27
SOX1O00570 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
SOX1O00570 AC015689.2-201ENST00000528172 1738 ntBASIC7.15□□□□□ -1.27
SOX1O00570 AL121835.2-201ENST00000624253 3502 ntBASIC7.15□□□□□ -1.27
SOX1O00570 AC007342.5-201ENST00000571340 2142 ntBASIC7.15□□□□□ -1.27
SOX1O00570 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
SOX1O00570 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
SOX1O00570 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC7.15□□□□□ -1.27
SOX1O00570 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SOX1O00570 AC061975.7-201ENST00000592016 2692 ntBASIC7.14□□□□□ -1.27
SOX1O00570 MYO1B-201ENST00000304164 4933 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SOX1O00570 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SOX1O00570 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
SOX1O00570 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
SOX1O00570 RNU6-500P-201ENST00000362349 107 ntBASIC7.14□□□□□ -1.27
SOX1O00570 RNA5SP110-201ENST00000362638 115 ntBASIC7.14□□□□□ -1.27
SOX1O00570 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC7.14□□□□□ -1.27
SOX1O00570 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
SOX1O00570 Y_RNA.390-201ENST00000383932 102 ntBASIC7.14□□□□□ -1.27
SOX1O00570 MIR143-201ENST00000385300 106 ntBASIC7.14□□□□□ -1.27
SOX1O00570 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SOX1O00570 RPL23AP59-201ENST00000399415 461 ntBASIC7.14□□□□□ -1.27
SOX1O00570 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SOX1O00570 RN7SKP293-201ENST00000411389 296 ntBASIC7.14□□□□□ -1.27
SOX1O00570 OFD1P15Y-201ENST00000411536 1392 ntBASIC7.14□□□□□ -1.27
SOX1O00570 HMGN1P14-201ENST00000412459 517 ntBASIC7.14□□□□□ -1.27
SOX1O00570 MTCO1P25-201ENST00000414449 1799 ntBASIC7.14□□□□□ -1.27
SOX1O00570 NENFP1-201ENST00000419476 466 ntBASIC7.14□□□□□ -1.27
SOX1O00570 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC7.14□□□□□ -1.27
SOX1O00570 RPA2P2-201ENST00000419698 796 ntBASIC7.14□□□□□ -1.27
SOX1O00570 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC7.14□□□□□ -1.27
SOX1O00570 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SOX1O00570 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC7.14□□□□□ -1.27
SOX1O00570 SNRPEP8-201ENST00000442866 260 ntBASIC7.14□□□□□ -1.27
SOX1O00570 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC7.14□□□□□ -1.27
SOX1O00570 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC7.14□□□□□ -1.27
SOX1O00570 EEF1E1P1-201ENST00000446998 430 ntBASIC7.14□□□□□ -1.27
SOX1O00570 SAMM50P1-201ENST00000455403 1399 ntBASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms