Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC090638.1-201ENST00000498296 909 ntBASIC5.05□□□□□ -1.6
UPK1AO00322 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.05□□□□□ -1.6
UPK1AO00322 HMGB1P44-201ENST00000508597 572 ntBASIC5.05□□□□□ -1.6
UPK1AO00322 SCARNA16.4-201ENST00000516956 187 ntBASIC5.05□□□□□ -1.6
UPK1AO00322 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.05□□□□□ -1.6
UPK1AO00322 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.05□□□□□ -1.6
UPK1AO00322 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.05□□□□□ -1.6
UPK1AO00322 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.05□□□□□ -1.6
UPK1AO00322 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.05□□□□□ -1.6
UPK1AO00322 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.05□□□□□ -1.6
UPK1AO00322 AC104695.2-201ENST00000605056 775 ntBASIC5.05□□□□□ -1.6
UPK1AO00322 AC010245.2-201ENST00000606908 1167 ntBASIC5.05□□□□□ -1.6
UPK1AO00322 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
UPK1AO00322 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.05□□□□□ -1.6
UPK1AO00322 AL357153.4-201ENST00000620487 1016 ntBASIC5.05□□□□□ -1.6
UPK1AO00322 AC099654.6-201ENST00000636487 512 ntBASIC5.05□□□□□ -1.6
UPK1AO00322 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
UPK1AO00322 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
UPK1AO00322 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
UPK1AO00322 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
UPK1AO00322 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
UPK1AO00322 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.05□□□□□ -1.6
UPK1AO00322 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
UPK1AO00322 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
UPK1AO00322 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.05□□□□□ -1.6
UPK1AO00322 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
UPK1AO00322 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
UPK1AO00322 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
UPK1AO00322 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
UPK1AO00322 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
UPK1AO00322 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
UPK1AO00322 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.04□□□□□ -1.6
UPK1AO00322 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
UPK1AO00322 RNA5SP319-201ENST00000362768 119 ntBASIC5.04□□□□□ -1.6
UPK1AO00322 RN7SKP124-201ENST00000364730 341 ntBASIC5.04□□□□□ -1.6
UPK1AO00322 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.04□□□□□ -1.6
UPK1AO00322 PRUNEP1-201ENST00000425846 705 ntBASIC5.04□□□□□ -1.6
UPK1AO00322 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.04□□□□□ -1.6
UPK1AO00322 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.04□□□□□ -1.6
UPK1AO00322 RN7SL51P-201ENST00000468230 285 ntBASIC5.04□□□□□ -1.6
UPK1AO00322 NIFKP7-201ENST00000503365 834 ntBASIC5.04□□□□□ -1.6
UPK1AO00322 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.04□□□□□ -1.6
UPK1AO00322 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.04□□□□□ -1.6
UPK1AO00322 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.04□□□□□ -1.6
UPK1AO00322 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.04□□□□□ -1.6
UPK1AO00322 AP004607.2-201ENST00000533949 322 ntBASIC5.04□□□□□ -1.6
UPK1AO00322 AC027544.3-201ENST00000535082 757 ntBASIC5.04□□□□□ -1.6
UPK1AO00322 AC020978.7-201ENST00000575953 1187 ntBASIC5.04□□□□□ -1.6
UPK1AO00322 AC022884.2-201ENST00000578535 580 ntBASIC5.04□□□□□ -1.6
UPK1AO00322 RN7SL356P-201ENST00000582228 248 ntBASIC5.04□□□□□ -1.6
UPK1AO00322 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.04□□□□□ -1.6
UPK1AO00322 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.04□□□□□ -1.6
UPK1AO00322 AC000068.2-201ENST00000608816 460 ntBASIC5.04□□□□□ -1.6
UPK1AO00322 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.04□□□□□ -1.6
UPK1AO00322 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
UPK1AO00322 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.04□□□□□ -1.6
UPK1AO00322 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
UPK1AO00322 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
UPK1AO00322 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
UPK1AO00322 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
UPK1AO00322 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.04□□□□□ -1.6
UPK1AO00322 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
UPK1AO00322 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.04□□□□□ -1.6
UPK1AO00322 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
UPK1AO00322 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.03□□□□□ -1.6
UPK1AO00322 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
UPK1AO00322 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.03□□□□□ -1.6
UPK1AO00322 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.03□□□□□ -1.6
UPK1AO00322 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
UPK1AO00322 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
UPK1AO00322 SNORA17A-201ENST00000391185 133 ntBASIC5.03□□□□□ -1.6
UPK1AO00322 RN7SKP293-201ENST00000411389 296 ntBASIC5.03□□□□□ -1.6
UPK1AO00322 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.03□□□□□ -1.6
UPK1AO00322 NANOGP4-201ENST00000427230 913 ntBASIC5.03□□□□□ -1.6
UPK1AO00322 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.03□□□□□ -1.6
UPK1AO00322 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.03□□□□□ -1.6
UPK1AO00322 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.03□□□□□ -1.6
UPK1AO00322 RPL35AP19-201ENST00000469425 329 ntBASIC5.03□□□□□ -1.6
UPK1AO00322 EIF1P7-201ENST00000487533 337 ntBASIC5.03□□□□□ -1.6
UPK1AO00322 RN7SL466P-201ENST00000497546 295 ntBASIC5.03□□□□□ -1.6
UPK1AO00322 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.03□□□□□ -1.6
UPK1AO00322 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.03□□□□□ -1.6
UPK1AO00322 RNU6-513P-201ENST00000516104 104 ntBASIC5.03□□□□□ -1.6
UPK1AO00322 AC020937.1-201ENST00000519677 1013 ntBASIC5.03□□□□□ -1.6
UPK1AO00322 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.03□□□□□ -1.6
UPK1AO00322 BLZF2P-201ENST00000553776 1130 ntBASIC5.03□□□□□ -1.6
UPK1AO00322 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.03□□□□□ -1.6
UPK1AO00322 AC127381.1-201ENST00000555979 939 ntBASIC5.03□□□□□ -1.6
UPK1AO00322 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.03□□□□□ -1.6
UPK1AO00322 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.03□□□□□ -1.6
UPK1AO00322 AC060766.1-201ENST00000590824 627 ntBASIC5.03□□□□□ -1.6
UPK1AO00322 AL034374.2-201ENST00000605281 548 ntBASIC5.03□□□□□ -1.6
UPK1AO00322 AC026124.2-201ENST00000621847 656 ntBASIC5.03□□□□□ -1.6
UPK1AO00322 AP003400.3-201ENST00000624904 346 ntBASIC5.03□□□□□ -1.6
UPK1AO00322 SNORA17.5-201ENST00000630429 132 ntBASIC5.03□□□□□ -1.6
UPK1AO00322 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.03□□□□□ -1.6
UPK1AO00322 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.03□□□□□ -1.6
UPK1AO00322 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.03□□□□□ -1.6
UPK1AO00322 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
UPK1AO00322 AC000374.1-201ENST00000434698 1745 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms