Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 RNU4-40P-201ENST00000364351 143 ntBASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 RNA5SP500-201ENST00000364486 119 ntBASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 AC007618.1-201ENST00000366455 732 ntBASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 NPM1P37-201ENST00000403105 874 ntBASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 BX664727.1-201ENST00000416024 466 ntBASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 AC004854.1-201ENST00000440356 349 ntBASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 RPL7P33-201ENST00000444159 742 ntBASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 AL161722.1-201ENST00000446972 1032 ntBASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 AC021146.7-201ENST00000509604 775 ntBASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 AC008429.4-201ENST00000521201 182 ntBASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 HMGN2P36-201ENST00000529541 409 ntBASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 OR4A40P-201ENST00000533878 948 ntBASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 DUX4L52-201ENST00000549363 777 ntBASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 MTND1P24-201ENST00000552175 861 ntBASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 MIR4433B-201ENST00000581329 102 ntBASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 AL583832.1-201ENST00000603227 784 ntBASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 AC005034.4-201ENST00000603612 899 ntBASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 AP001541.1-201ENST00000623322 1904 ntBASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 PARP4P2-201ENST00000446672 3326 ntBASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC187A0A096LP49 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 AC007382.1-201ENST00000624376 2618 ntBASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 OR10R3P-201ENST00000361688 942 ntBASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 MIR105-2-201ENST00000385083 81 ntBASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 AL391422.1-201ENST00000402155 436 ntBASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 HMGB1P20-201ENST00000402555 677 ntBASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 AL078595.1-201ENST00000404458 226 ntBASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 NENFP1-201ENST00000419476 466 ntBASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 NMD3P2-201ENST00000421815 761 ntBASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 AL355433.1-201ENST00000422804 300 ntBASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 VN1R42P-201ENST00000424651 344 ntBASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 BX119904.1-201ENST00000432026 348 ntBASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 AC073909.1-201ENST00000447112 999 ntBASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 AC092691.2-201ENST00000461787 803 ntBASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 AC006539.1-201ENST00000481419 501 ntBASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 AC008629.2-201ENST00000503783 483 ntBASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 PRELID3BP6-201ENST00000503839 571 ntBASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 AC074087.1-201ENST00000512059 724 ntBASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 OR7E13P-201ENST00000526052 910 ntBASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 AP003066.2-201ENST00000529375 555 ntBASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 OR6M2P-201ENST00000529831 871 ntBASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 AC087894.1-201ENST00000538359 518 ntBASIC5.7□□□□□ -1.5
CCDC187A0A096LP49 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms