Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
VPS29Q9UBQ0 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.11□□□□□ -1.59
VPS29Q9UBQ0 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.1□□□□□ -1.59
VPS29Q9UBQ0 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
VPS29Q9UBQ0 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
VPS29Q9UBQ0 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS29Q9UBQ0 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VPS29Q9UBQ0 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
VPS29Q9UBQ0 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VPS29Q9UBQ0 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
VPS29Q9UBQ0 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS29Q9UBQ0 RNA5SP487-201ENST00000410186 122 ntBASIC5.1□□□□□ -1.59
VPS29Q9UBQ0 GABARAPL3-201ENST00000412799 354 ntBASIC5.1□□□□□ -1.59
VPS29Q9UBQ0 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.1□□□□□ -1.59
VPS29Q9UBQ0 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VPS29Q9UBQ0 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.1□□□□□ -1.59
VPS29Q9UBQ0 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.1□□□□□ -1.59
VPS29Q9UBQ0 RPS27AP2-201ENST00000457576 465 ntBASIC5.1□□□□□ -1.59
VPS29Q9UBQ0 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.1□□□□□ -1.59
VPS29Q9UBQ0 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.1□□□□□ -1.59
VPS29Q9UBQ0 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VPS29Q9UBQ0 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VPS29Q9UBQ0 AC027369.5-201ENST00000533838 755 ntBASIC5.1□□□□□ -1.59
VPS29Q9UBQ0 YWHABP2-201ENST00000540201 713 ntBASIC5.1□□□□□ -1.59
VPS29Q9UBQ0 BLZF2P-201ENST00000553776 1130 ntBASIC5.1□□□□□ -1.59
VPS29Q9UBQ0 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.1□□□□□ -1.59
VPS29Q9UBQ0 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.1□□□□□ -1.59
VPS29Q9UBQ0 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.1□□□□□ -1.59
VPS29Q9UBQ0 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.1□□□□□ -1.59
VPS29Q9UBQ0 AC092944.2-201ENST00000605443 889 ntBASIC5.1□□□□□ -1.59
VPS29Q9UBQ0 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.1□□□□□ -1.59
VPS29Q9UBQ0 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.1□□□□□ -1.59
VPS29Q9UBQ0 MIR6839-201ENST00000620425 113 ntBASIC5.1□□□□□ -1.59
VPS29Q9UBQ0 AC022417.1-201ENST00000624768 1303 ntBASIC5.1□□□□□ -1.59
VPS29Q9UBQ0 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
VPS29Q9UBQ0 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
VPS29Q9UBQ0 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS29Q9UBQ0 AL031595.2-201ENST00000624215 19071 ntBASIC5.1□□□□□ -1.59
VPS29Q9UBQ0 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VPS29Q9UBQ0 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.1□□□□□ -1.59
VPS29Q9UBQ0 AL034549.2-201ENST00000618285 3373 ntBASIC5.1□□□□□ -1.59
VPS29Q9UBQ0 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS29Q9UBQ0 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 TMSB4XP4-201ENST00000323496 618 ntBASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 AC005294.1-201ENST00000355509 281 ntBASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 U3.7-201ENST00000363668 216 ntBASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 RN7SKP124-201ENST00000364730 341 ntBASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 RN7SKP286-201ENST00000410894 299 ntBASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 PCNPP4-201ENST00000414817 517 ntBASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 NAP1L4P2-201ENST00000425958 899 ntBASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 AL161636.2-201ENST00000445179 927 ntBASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 RANP1-206ENST00000455094 651 ntBASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 RPL7P40-201ENST00000481703 745 ntBASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 RPL7P41-201ENST00000485823 957 ntBASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 EIF1P7-201ENST00000487533 337 ntBASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 SNORA70.11-201ENST00000515987 138 ntBASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 SNORA70.13-201ENST00000516116 138 ntBASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 AC022404.1-201ENST00000555320 273 ntBASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 AC090286.3-201ENST00000573133 187 ntBASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 AC008521.2-201ENST00000591021 259 ntBASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 AC009597.2-201ENST00000604659 592 ntBASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 AL162431.4-201ENST00000604674 411 ntBASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 RNA5SP440-201ENST00000612665 119 ntBASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 FRG1EP-201ENST00000634469 770 ntBASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 OR8A1-204ENST00000642111 1145 ntBASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VPS29Q9UBQ0 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
VPS29Q9UBQ0 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.09□□□□□ -1.6
VPS29Q9UBQ0 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
VPS29Q9UBQ0 AC023421.1-201ENST00000590535 1785 ntBASIC5.09□□□□□ -1.6
VPS29Q9UBQ0 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.09□□□□□ -1.6
VPS29Q9UBQ0 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.08□□□□□ -1.6
VPS29Q9UBQ0 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms