Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDK5RAP2Q96SN8 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CDK5RAP2Q96SN8 RNA5SP305-201ENST00000362665 119 ntBASIC6.18□□□□□ -1.42
CDK5RAP2Q96SN8 RNA5SP428-201ENST00000365129 132 ntBASIC6.18□□□□□ -1.42
CDK5RAP2Q96SN8 RNU4-2-201ENST00000365668 141 ntBASIC6.18□□□□□ -1.42
CDK5RAP2Q96SN8 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC6.18□□□□□ -1.42
CDK5RAP2Q96SN8 AC093655.2-201ENST00000425735 631 ntBASIC6.18□□□□□ -1.42
CDK5RAP2Q96SN8 BX323845.1-201ENST00000432417 179 ntBASIC6.18□□□□□ -1.42
CDK5RAP2Q96SN8 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC6.18□□□□□ -1.42
CDK5RAP2Q96SN8 AC011447.4-201ENST00000587562 111 ntBASIC6.18□□□□□ -1.42
CDK5RAP2Q96SN8 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDK5RAP2Q96SN8 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC6.18□□□□□ -1.42
CDK5RAP2Q96SN8 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
CDK5RAP2Q96SN8 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CDK5RAP2Q96SN8 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDK5RAP2Q96SN8 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDK5RAP2Q96SN8 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDK5RAP2Q96SN8 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CDK5RAP2Q96SN8 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CDK5RAP2Q96SN8 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDK5RAP2Q96SN8 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDK5RAP2Q96SN8 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
CDK5RAP2Q96SN8 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CDK5RAP2Q96SN8 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDK5RAP2Q96SN8 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.17□□□□□ -1.42
CDK5RAP2Q96SN8 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC6.17□□□□□ -1.42
CDK5RAP2Q96SN8 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.17□□□□□ -1.42
CDK5RAP2Q96SN8 AC097173.1-201ENST00000505862 819 ntBASIC6.17□□□□□ -1.42
CDK5RAP2Q96SN8 COX6B1P5-201ENST00000509843 249 ntBASIC6.17□□□□□ -1.42
CDK5RAP2Q96SN8 AC136777.2-201ENST00000522979 358 ntBASIC6.17□□□□□ -1.42
CDK5RAP2Q96SN8 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6.17□□□□□ -1.42
CDK5RAP2Q96SN8 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.17□□□□□ -1.42
CDK5RAP2Q96SN8 UBA2-208ENST00000592791 910 ntTSL 2 BASIC6.17□□□□□ -1.42
CDK5RAP2Q96SN8 AP005131.7-201ENST00000610087 611 ntBASIC6.17□□□□□ -1.42
CDK5RAP2Q96SN8 AC007786.3-201ENST00000615154 596 ntBASIC6.17□□□□□ -1.42
CDK5RAP2Q96SN8 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.17□□□□□ -1.42
CDK5RAP2Q96SN8 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDK5RAP2Q96SN8 CASC19-221ENST00000641309 1382 ntBASIC6.17□□□□□ -1.42
CDK5RAP2Q96SN8 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDK5RAP2Q96SN8 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDK5RAP2Q96SN8 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CDK5RAP2Q96SN8 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CDK5RAP2Q96SN8 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CDK5RAP2Q96SN8 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CDK5RAP2Q96SN8 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CDK5RAP2Q96SN8 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
CDK5RAP2Q96SN8 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CDK5RAP2Q96SN8 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDK5RAP2Q96SN8 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC6.17□□□□□ -1.42
CDK5RAP2Q96SN8 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC6.17□□□□□ -1.42
CDK5RAP2Q96SN8 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC6.17□□□□□ -1.42
CDK5RAP2Q96SN8 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.17□□□□□ -1.42
CDK5RAP2Q96SN8 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.17□□□□□ -1.42
CDK5RAP2Q96SN8 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CDK5RAP2Q96SN8 AL139124.1-201ENST00000609123 421 ntBASIC6.17□□□□□ -1.42
CDK5RAP2Q96SN8 AC112694.2-201ENST00000623697 768 ntBASIC6.17□□□□□ -1.42
CDK5RAP2Q96SN8 CR381572.2-201ENST00000624852 397 ntBASIC6.17□□□□□ -1.42
CDK5RAP2Q96SN8 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CDK5RAP2Q96SN8 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
CDK5RAP2Q96SN8 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
CDK5RAP2Q96SN8 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
CDK5RAP2Q96SN8 CASC19-281ENST00000642118 1554 ntBASIC6.17□□□□□ -1.42
CDK5RAP2Q96SN8 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.16□□□□□ -1.42
CDK5RAP2Q96SN8 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC6.16□□□□□ -1.42
CDK5RAP2Q96SN8 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC6.16□□□□□ -1.42
CDK5RAP2Q96SN8 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CDK5RAP2Q96SN8 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CDK5RAP2Q96SN8 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC6.16□□□□□ -1.42
CDK5RAP2Q96SN8 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CDK5RAP2Q96SN8 MIR1182-201ENST00000408363 97 ntBASIC6.16□□□□□ -1.42
CDK5RAP2Q96SN8 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC6.16□□□□□ -1.42
CDK5RAP2Q96SN8 AC093162.1-201ENST00000419682 124 ntBASIC6.16□□□□□ -1.42
CDK5RAP2Q96SN8 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.16□□□□□ -1.42
CDK5RAP2Q96SN8 AL360081.1-201ENST00000428299 555 ntBASIC6.16□□□□□ -1.42
CDK5RAP2Q96SN8 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC6.16□□□□□ -1.42
CDK5RAP2Q96SN8 AP000797.2-201ENST00000475768 606 ntBASIC6.16□□□□□ -1.42
CDK5RAP2Q96SN8 AC105233.1-201ENST00000498840 781 ntBASIC6.16□□□□□ -1.42
CDK5RAP2Q96SN8 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CDK5RAP2Q96SN8 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.16□□□□□ -1.42
CDK5RAP2Q96SN8 AC004980.4-201ENST00000513375 203 ntBASIC6.16□□□□□ -1.42
CDK5RAP2Q96SN8 RNA5SP43-201ENST00000516559 110 ntBASIC6.16□□□□□ -1.42
CDK5RAP2Q96SN8 IGHVII-44-2-201ENST00000517728 250 ntBASIC6.16□□□□□ -1.42
CDK5RAP2Q96SN8 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.16□□□□□ -1.42
CDK5RAP2Q96SN8 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.16□□□□□ -1.42
CDK5RAP2Q96SN8 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC6.16□□□□□ -1.42
CDK5RAP2Q96SN8 SETP3-201ENST00000581726 813 ntBASIC6.16□□□□□ -1.42
CDK5RAP2Q96SN8 AC098935.2-201ENST00000604222 466 ntBASIC6.16□□□□□ -1.42
CDK5RAP2Q96SN8 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.16□□□□□ -1.42
CDK5RAP2Q96SN8 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC6.16□□□□□ -1.42
CDK5RAP2Q96SN8 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
CDK5RAP2Q96SN8 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CDK5RAP2Q96SN8 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CDK5RAP2Q96SN8 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.16□□□□□ -1.42
CDK5RAP2Q96SN8 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
CDK5RAP2Q96SN8 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CDK5RAP2Q96SN8 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
CDK5RAP2Q96SN8 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CDK5RAP2Q96SN8 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
CDK5RAP2Q96SN8 INTS6P1-201ENST00000504674 2530 ntBASIC6.16□□□□□ -1.42
CDK5RAP2Q96SN8 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms