Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
TOPBP1Q92547 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
TOPBP1Q92547 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
TOPBP1Q92547 HSPD1P8-201ENST00000400121 1658 ntBASIC8.68□□□□□ -1.02
TOPBP1Q92547 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
TOPBP1Q92547 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC8.68□□□□□ -1.02
TOPBP1Q92547 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
TOPBP1Q92547 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC8.68□□□□□ -1.02
TOPBP1Q92547 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
TOPBP1Q92547 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
TOPBP1Q92547 AC008171.1-201ENST00000395058 200 ntBASIC8.68□□□□□ -1.02
TOPBP1Q92547 RN7SKP27-201ENST00000410684 333 ntBASIC8.68□□□□□ -1.02
TOPBP1Q92547 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC8.68□□□□□ -1.02
TOPBP1Q92547 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC8.68□□□□□ -1.02
TOPBP1Q92547 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC8.68□□□□□ -1.02
TOPBP1Q92547 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC8.68□□□□□ -1.02
TOPBP1Q92547 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC8.68□□□□□ -1.02
TOPBP1Q92547 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC8.68□□□□□ -1.02
TOPBP1Q92547 SCARNA9-201ENST00000530422 353 ntBASIC8.68□□□□□ -1.02
TOPBP1Q92547 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC8.68□□□□□ -1.02
TOPBP1Q92547 MIR4277-201ENST00000578298 84 ntBASIC8.68□□□□□ -1.02
TOPBP1Q92547 AC005377.1-201ENST00000605126 456 ntBASIC8.68□□□□□ -1.02
TOPBP1Q92547 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
TOPBP1Q92547 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
TOPBP1Q92547 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC8.68□□□□□ -1.02
TOPBP1Q92547 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
TOPBP1Q92547 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC8.67□□□□□ -1.02
TOPBP1Q92547 KARSP3-201ENST00000571212 1504 ntBASIC8.67□□□□□ -1.02
TOPBP1Q92547 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
TOPBP1Q92547 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
TOPBP1Q92547 CCDC162P-202ENST00000368966 6751 ntBASIC8.67□□□□□ -1.02
TOPBP1Q92547 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC8.67□□□□□ -1.02
TOPBP1Q92547 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC8.67□□□□□ -1.02
TOPBP1Q92547 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
TOPBP1Q92547 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC8.67□□□□□ -1.02
TOPBP1Q92547 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
TOPBP1Q92547 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC8.67□□□□□ -1.02
TOPBP1Q92547 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC8.67□□□□□ -1.02
TOPBP1Q92547 LINC02210-201ENST00000444561 288 ntBASIC8.67□□□□□ -1.02
TOPBP1Q92547 IGHV5-78-201ENST00000450948 295 ntBASIC8.67□□□□□ -1.02
TOPBP1Q92547 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC8.67□□□□□ -1.02
TOPBP1Q92547 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
TOPBP1Q92547 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC8.67□□□□□ -1.02
TOPBP1Q92547 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
TOPBP1Q92547 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
TOPBP1Q92547 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC8.67□□□□□ -1.02
TOPBP1Q92547 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC8.67□□□□□ -1.02
TOPBP1Q92547 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
TOPBP1Q92547 MAPK10-371ENST00000641952 5209 ntBASIC8.66□□□□□ -1.02
TOPBP1Q92547 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC8.66□□□□□ -1.02
TOPBP1Q92547 RNU1-74P-201ENST00000384108 171 ntBASIC8.66□□□□□ -1.02
TOPBP1Q92547 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
TOPBP1Q92547 RNU4-25P-201ENST00000410569 230 ntBASIC8.66□□□□□ -1.02
TOPBP1Q92547 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC8.66□□□□□ -1.02
TOPBP1Q92547 BX510359.2-201ENST00000417920 305 ntBASIC8.66□□□□□ -1.02
TOPBP1Q92547 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC8.66□□□□□ -1.02
TOPBP1Q92547 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC8.66□□□□□ -1.02
TOPBP1Q92547 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
TOPBP1Q92547 AL356390.1-201ENST00000455684 397 ntBASIC8.66□□□□□ -1.02
TOPBP1Q92547 AC025674.1-201ENST00000507074 324 ntBASIC8.66□□□□□ -1.02
TOPBP1Q92547 GAPDHP62-201ENST00000515313 990 ntBASIC8.66□□□□□ -1.02
TOPBP1Q92547 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC8.66□□□□□ -1.02
TOPBP1Q92547 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC8.66□□□□□ -1.02
TOPBP1Q92547 NMNAT1P1-201ENST00000554095 876 ntBASIC8.66□□□□□ -1.02
TOPBP1Q92547 MIR4715-201ENST00000584117 79 ntBASIC8.66□□□□□ -1.02
TOPBP1Q92547 AC008124.1-201ENST00000609803 9730 ntBASIC8.66□□□□□ -1.02
TOPBP1Q92547 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
TOPBP1Q92547 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TOPBP1Q92547 AC140479.2-201ENST00000421567 3130 ntBASIC8.66□□□□□ -1.02
TOPBP1Q92547 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TOPBP1Q92547 AC078842.2-201ENST00000447529 1835 ntTSL 2 BASIC8.66□□□□□ -1.02
TOPBP1Q92547 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC8.66□□□□□ -1.02
TOPBP1Q92547 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
TOPBP1Q92547 AL158152.1-201ENST00000602652 1435 ntBASIC8.66□□□□□ -1.02
TOPBP1Q92547 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
TOPBP1Q92547 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
TOPBP1Q92547 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
TOPBP1Q92547 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC8.65□□□□□ -1.02
TOPBP1Q92547 RNA5-8SP7-201ENST00000363443 155 ntBASIC8.65□□□□□ -1.02
TOPBP1Q92547 RNA5SP515-201ENST00000364570 118 ntBASIC8.65□□□□□ -1.02
TOPBP1Q92547 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
TOPBP1Q92547 PPIAP9-201ENST00000403866 498 ntBASIC8.65□□□□□ -1.02
TOPBP1Q92547 GTF2IP5-201ENST00000414608 731 ntBASIC8.65□□□□□ -1.02
TOPBP1Q92547 SLC9B1P4-201ENST00000421957 1288 ntBASIC8.65□□□□□ -1.02
TOPBP1Q92547 REG1CP-206ENST00000447469 496 ntBASIC8.65□□□□□ -1.02
TOPBP1Q92547 NOP56P2-201ENST00000447491 769 ntBASIC8.65□□□□□ -1.02
TOPBP1Q92547 AURKAPS2-201ENST00000454983 333 ntBASIC8.65□□□□□ -1.02
TOPBP1Q92547 OR52A4P-201ENST00000472867 958 ntBASIC8.65□□□□□ -1.02
TOPBP1Q92547 OR11I1P-201ENST00000486033 954 ntBASIC8.65□□□□□ -1.02
TOPBP1Q92547 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC8.65□□□□□ -1.02
TOPBP1Q92547 AC083829.1-201ENST00000503756 657 ntBASIC8.65□□□□□ -1.02
TOPBP1Q92547 AC097173.1-201ENST00000505862 819 ntBASIC8.65□□□□□ -1.02
TOPBP1Q92547 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC8.65□□□□□ -1.02
TOPBP1Q92547 RNF138P2-201ENST00000603490 592 ntBASIC8.65□□□□□ -1.02
TOPBP1Q92547 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
TOPBP1Q92547 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC8.65□□□□□ -1.02
TOPBP1Q92547 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
TOPBP1Q92547 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC8.65□□□□□ -1.02
TOPBP1Q92547 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
TOPBP1Q92547 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms