Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC8.14□□□□□ -1.11
VPS8Q8N3P4 OR10G5P-201ENST00000532733 358 ntBASIC8.14□□□□□ -1.11
VPS8Q8N3P4 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC8.14□□□□□ -1.11
VPS8Q8N3P4 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC8.14□□□□□ -1.11
VPS8Q8N3P4 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC8.14□□□□□ -1.11
VPS8Q8N3P4 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
VPS8Q8N3P4 CR383656.5-201ENST00000547616 1340 ntBASIC8.14□□□□□ -1.11
VPS8Q8N3P4 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
VPS8Q8N3P4 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
VPS8Q8N3P4 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC8.13□□□□□ -1.11
VPS8Q8N3P4 RNU4-4P-201ENST00000364588 130 ntBASIC8.13□□□□□ -1.11
VPS8Q8N3P4 NDUFA5P8-201ENST00000449019 346 ntBASIC8.13□□□□□ -1.11
VPS8Q8N3P4 GAPDHP14-201ENST00000450472 937 ntBASIC8.13□□□□□ -1.11
VPS8Q8N3P4 RN7SL189P-201ENST00000468631 289 ntBASIC8.13□□□□□ -1.11
VPS8Q8N3P4 AC020779.1-201ENST00000478757 796 ntBASIC8.13□□□□□ -1.11
VPS8Q8N3P4 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC8.13□□□□□ -1.11
VPS8Q8N3P4 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC8.13□□□□□ -1.11
VPS8Q8N3P4 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC8.13□□□□□ -1.11
VPS8Q8N3P4 AC004980.4-201ENST00000513375 203 ntBASIC8.13□□□□□ -1.11
VPS8Q8N3P4 RNU4ATAC18P-201ENST00000516179 126 ntBASIC8.13□□□□□ -1.11
VPS8Q8N3P4 AC092709.1-201ENST00000521355 1045 ntBASIC8.13□□□□□ -1.11
VPS8Q8N3P4 AP003080.1-202ENST00000526526 915 ntBASIC8.13□□□□□ -1.11
VPS8Q8N3P4 BNIP3P35-201ENST00000604530 490 ntBASIC8.13□□□□□ -1.11
VPS8Q8N3P4 AC079777.1-201ENST00000623836 1953 ntBASIC8.13□□□□□ -1.11
VPS8Q8N3P4 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC8.13□□□□□ -1.11
VPS8Q8N3P4 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
VPS8Q8N3P4 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
VPS8Q8N3P4 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
VPS8Q8N3P4 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
VPS8Q8N3P4 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
VPS8Q8N3P4 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
VPS8Q8N3P4 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC8.13□□□□□ -1.11
VPS8Q8N3P4 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
VPS8Q8N3P4 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
VPS8Q8N3P4 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC8.13□□□□□ -1.11
VPS8Q8N3P4 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
VPS8Q8N3P4 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC8.13□□□□□ -1.11
VPS8Q8N3P4 MRRFP1-201ENST00000435941 1675 ntBASIC8.13□□□□□ -1.11
VPS8Q8N3P4 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
VPS8Q8N3P4 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
VPS8Q8N3P4 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
VPS8Q8N3P4 OTX2P1-201ENST00000450956 354 ntBASIC8.12□□□□□ -1.11
VPS8Q8N3P4 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC8.12□□□□□ -1.11
VPS8Q8N3P4 OR5AZ1P-201ENST00000527448 943 ntBASIC8.12□□□□□ -1.11
VPS8Q8N3P4 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC8.12□□□□□ -1.11
VPS8Q8N3P4 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC8.12□□□□□ -1.11
VPS8Q8N3P4 UBA2-208ENST00000592791 910 ntTSL 2 BASIC8.12□□□□□ -1.11
VPS8Q8N3P4 AC037198.3-201ENST00000616754 526 ntBASIC8.12□□□□□ -1.11
VPS8Q8N3P4 AC087385.3-201ENST00000620477 187 ntBASIC8.12□□□□□ -1.11
VPS8Q8N3P4 AP002799.1-201ENST00000623552 423 ntBASIC8.12□□□□□ -1.11
VPS8Q8N3P4 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC8.12□□□□□ -1.11
VPS8Q8N3P4 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC8.12□□□□□ -1.11
VPS8Q8N3P4 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
VPS8Q8N3P4 AL022323.4-201ENST00000623980 13120 ntBASIC8.12□□□□□ -1.11
VPS8Q8N3P4 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
VPS8Q8N3P4 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
VPS8Q8N3P4 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC8.12□□□□□ -1.11
VPS8Q8N3P4 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC8.12□□□□□ -1.11
VPS8Q8N3P4 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
VPS8Q8N3P4 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
VPS8Q8N3P4 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
VPS8Q8N3P4 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC8.12□□□□□ -1.11
VPS8Q8N3P4 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
VPS8Q8N3P4 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC8.12□□□□□ -1.11
VPS8Q8N3P4 OFD1P17-201ENST00000437639 3018 ntBASIC8.12□□□□□ -1.11
VPS8Q8N3P4 AL078599.1-201ENST00000402075 293 ntBASIC8.12□□□□□ -1.11
VPS8Q8N3P4 RN7SKP114-201ENST00000410327 279 ntBASIC8.12□□□□□ -1.11
VPS8Q8N3P4 RBMY2QP-201ENST00000429799 1147 ntBASIC8.12□□□□□ -1.11
VPS8Q8N3P4 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC8.12□□□□□ -1.11
VPS8Q8N3P4 GAPDHP58-201ENST00000438477 1006 ntBASIC8.12□□□□□ -1.11
VPS8Q8N3P4 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC8.12□□□□□ -1.11
VPS8Q8N3P4 AC022133.1-201ENST00000490961 571 ntBASIC8.12□□□□□ -1.11
VPS8Q8N3P4 NDUFA5P12-201ENST00000503796 343 ntBASIC8.12□□□□□ -1.11
VPS8Q8N3P4 RNA5SP43-201ENST00000516559 110 ntBASIC8.12□□□□□ -1.11
VPS8Q8N3P4 AP000676.2-201ENST00000529711 301 ntBASIC8.12□□□□□ -1.11
VPS8Q8N3P4 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC8.12□□□□□ -1.11
VPS8Q8N3P4 AC040958.1-201ENST00000561102 201 ntBASIC8.12□□□□□ -1.11
VPS8Q8N3P4 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC8.12□□□□□ -1.11
VPS8Q8N3P4 AC093799.2-201ENST00000610062 578 ntBASIC8.12□□□□□ -1.11
VPS8Q8N3P4 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC8.11□□□□□ -1.11
VPS8Q8N3P4 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
VPS8Q8N3P4 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
VPS8Q8N3P4 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
VPS8Q8N3P4 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
VPS8Q8N3P4 THAP12P4-201ENST00000528321 2266 ntBASIC8.11□□□□□ -1.11
VPS8Q8N3P4 RMST-209ENST00000639542 3269 ntTSL 5 BASIC8.11□□□□□ -1.11
VPS8Q8N3P4 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC8.11□□□□□ -1.11
VPS8Q8N3P4 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
VPS8Q8N3P4 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC8.11□□□□□ -1.11
VPS8Q8N3P4 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
VPS8Q8N3P4 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
VPS8Q8N3P4 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC8.11□□□□□ -1.11
VPS8Q8N3P4 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC8.11□□□□□ -1.11
VPS8Q8N3P4 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
VPS8Q8N3P4 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
VPS8Q8N3P4 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
VPS8Q8N3P4 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
VPS8Q8N3P4 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
VPS8Q8N3P4 OR8V1P-201ENST00000395193 873 ntBASIC8.11□□□□□ -1.11
VPS8Q8N3P4 AL589647.1-201ENST00000402485 466 ntBASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms