Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
VRK3Q8IV63 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.88□□□□□ -1.47
VRK3Q8IV63 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
VRK3Q8IV63 COX6B1P3-201ENST00000312310 260 ntBASIC5.88□□□□□ -1.47
VRK3Q8IV63 RNFT1P3-201ENST00000340898 1052 ntBASIC5.88□□□□□ -1.47
VRK3Q8IV63 Y_RNA.169-201ENST00000363745 96 ntBASIC5.88□□□□□ -1.47
VRK3Q8IV63 Y_RNA.201-201ENST00000364052 96 ntBASIC5.88□□□□□ -1.47
VRK3Q8IV63 BMS1P3-201ENST00000372011 932 ntBASIC5.88□□□□□ -1.47
VRK3Q8IV63 RNU6-354P-201ENST00000383862 107 ntBASIC5.88□□□□□ -1.47
VRK3Q8IV63 RNU6-610P-201ENST00000384264 107 ntBASIC5.88□□□□□ -1.47
VRK3Q8IV63 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VRK3Q8IV63 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
VRK3Q8IV63 AL121835.1-201ENST00000404250 354 ntBASIC5.88□□□□□ -1.47
VRK3Q8IV63 SNRPEP6-201ENST00000407465 277 ntBASIC5.88□□□□□ -1.47
VRK3Q8IV63 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.88□□□□□ -1.47
VRK3Q8IV63 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VRK3Q8IV63 RN7SKP166-201ENST00000410812 305 ntBASIC5.88□□□□□ -1.47
VRK3Q8IV63 RNU4-27P-201ENST00000410889 139 ntBASIC5.88□□□□□ -1.47
VRK3Q8IV63 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.88□□□□□ -1.47
VRK3Q8IV63 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.88□□□□□ -1.47
VRK3Q8IV63 RPL24P2-201ENST00000421023 475 ntBASIC5.88□□□□□ -1.47
VRK3Q8IV63 AL390023.1-201ENST00000428836 262 ntBASIC5.88□□□□□ -1.47
VRK3Q8IV63 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.88□□□□□ -1.47
VRK3Q8IV63 GAPDHP75-201ENST00000433910 943 ntBASIC5.88□□□□□ -1.47
VRK3Q8IV63 AL353706.1-201ENST00000436728 494 ntBASIC5.88□□□□□ -1.47
VRK3Q8IV63 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC5.88□□□□□ -1.47
VRK3Q8IV63 TRIM60P16-201ENST00000444048 694 ntBASIC5.88□□□□□ -1.47
VRK3Q8IV63 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC5.88□□□□□ -1.47
VRK3Q8IV63 MTND1P1-201ENST00000445453 368 ntBASIC5.88□□□□□ -1.47
VRK3Q8IV63 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.88□□□□□ -1.47
VRK3Q8IV63 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC5.88□□□□□ -1.47
VRK3Q8IV63 AL445466.1-201ENST00000448432 357 ntBASIC5.88□□□□□ -1.47
VRK3Q8IV63 HMGB1P26-201ENST00000452520 628 ntBASIC5.88□□□□□ -1.47
VRK3Q8IV63 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC5.88□□□□□ -1.47
VRK3Q8IV63 AC009963.3-201ENST00000458090 486 ntBASIC5.88□□□□□ -1.47
VRK3Q8IV63 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC5.88□□□□□ -1.47
VRK3Q8IV63 ACA64.4-201ENST00000459070 127 ntBASIC5.88□□□□□ -1.47
VRK3Q8IV63 AC008379.1-201ENST00000463655 464 ntBASIC5.88□□□□□ -1.47
VRK3Q8IV63 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.88□□□□□ -1.47
VRK3Q8IV63 SETP6-201ENST00000479329 568 ntBASIC5.88□□□□□ -1.47
VRK3Q8IV63 AP002884.1-201ENST00000479691 655 ntBASIC5.88□□□□□ -1.47
VRK3Q8IV63 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.88□□□□□ -1.47
VRK3Q8IV63 RN7SL649P-201ENST00000496974 275 ntBASIC5.88□□□□□ -1.47
VRK3Q8IV63 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.88□□□□□ -1.47
VRK3Q8IV63 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.88□□□□□ -1.47
VRK3Q8IV63 OR5BM1P-201ENST00000512021 366 ntBASIC5.88□□□□□ -1.47
VRK3Q8IV63 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.88□□□□□ -1.47
VRK3Q8IV63 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.88□□□□□ -1.47
VRK3Q8IV63 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC5.88□□□□□ -1.47
VRK3Q8IV63 OR10V3P-201ENST00000525712 725 ntBASIC5.88□□□□□ -1.47
VRK3Q8IV63 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.88□□□□□ -1.47
VRK3Q8IV63 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
VRK3Q8IV63 LRRC6P1-201ENST00000532188 885 ntBASIC5.88□□□□□ -1.47
VRK3Q8IV63 OR7E128P-201ENST00000532736 1024 ntBASIC5.88□□□□□ -1.47
VRK3Q8IV63 GCSHP4-201ENST00000538792 439 ntBASIC5.88□□□□□ -1.47
VRK3Q8IV63 AC244502.2-201ENST00000543361 851 ntBASIC5.88□□□□□ -1.47
VRK3Q8IV63 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.88□□□□□ -1.47
VRK3Q8IV63 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
VRK3Q8IV63 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.88□□□□□ -1.47
VRK3Q8IV63 AC107958.1-201ENST00000556576 290 ntBASIC5.88□□□□□ -1.47
VRK3Q8IV63 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC5.88□□□□□ -1.47
VRK3Q8IV63 CYCSP38-201ENST00000559840 322 ntBASIC5.88□□□□□ -1.47
VRK3Q8IV63 AGGF1P7-201ENST00000562369 913 ntBASIC5.88□□□□□ -1.47
VRK3Q8IV63 AC005244.1-201ENST00000582566 339 ntBASIC5.88□□□□□ -1.47
VRK3Q8IV63 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.88□□□□□ -1.47
VRK3Q8IV63 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.88□□□□□ -1.47
VRK3Q8IV63 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.88□□□□□ -1.47
VRK3Q8IV63 AC080078.2-201ENST00000603766 501 ntBASIC5.88□□□□□ -1.47
VRK3Q8IV63 AL583856.2-201ENST00000606298 543 ntBASIC5.88□□□□□ -1.47
VRK3Q8IV63 AL392048.1-201ENST00000613946 534 ntBASIC5.88□□□□□ -1.47
VRK3Q8IV63 MIR1264-201ENST00000616374 69 ntBASIC5.88□□□□□ -1.47
VRK3Q8IV63 AL031667.3-201ENST00000620124 655 ntBASIC5.88□□□□□ -1.47
VRK3Q8IV63 AC104985.3-201ENST00000623479 597 ntBASIC5.88□□□□□ -1.47
VRK3Q8IV63 AC079298.2-201ENST00000623885 459 ntBASIC5.88□□□□□ -1.47
VRK3Q8IV63 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.88□□□□□ -1.47
VRK3Q8IV63 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.88□□□□□ -1.47
VRK3Q8IV63 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
VRK3Q8IV63 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VRK3Q8IV63 TCP1P3-201ENST00000414406 1498 ntBASIC5.88□□□□□ -1.47
VRK3Q8IV63 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.88□□□□□ -1.47
VRK3Q8IV63 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VRK3Q8IV63 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.88□□□□□ -1.47
VRK3Q8IV63 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.88□□□□□ -1.47
VRK3Q8IV63 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.88□□□□□ -1.47
VRK3Q8IV63 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.88□□□□□ -1.47
VRK3Q8IV63 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VRK3Q8IV63 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
VRK3Q8IV63 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VRK3Q8IV63 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VRK3Q8IV63 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VRK3Q8IV63 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VRK3Q8IV63 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.87□□□□□ -1.47
VRK3Q8IV63 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VRK3Q8IV63 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.87□□□□□ -1.47
VRK3Q8IV63 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
VRK3Q8IV63 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VRK3Q8IV63 AL451142.1-201ENST00000375867 775 ntBASIC5.87□□□□□ -1.47
VRK3Q8IV63 AC234772.1-201ENST00000377927 937 ntBASIC5.87□□□□□ -1.47
VRK3Q8IV63 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC5.87□□□□□ -1.47
VRK3Q8IV63 SNORD116-9-201ENST00000384000 95 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms