Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AC093591.2-201ENST00000565254 3843 ntBASIC4.86□□□□□ -1.63
LRRC28Q86X40 AC025574.1-201ENST00000554784 1653 ntBASIC4.86□□□□□ -1.63
LRRC28Q86X40 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
LRRC28Q86X40 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.86□□□□□ -1.63
LRRC28Q86X40 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LRRC28Q86X40 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC4.86□□□□□ -1.63
LRRC28Q86X40 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LRRC28Q86X40 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
LRRC28Q86X40 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LRRC28Q86X40 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LRRC28Q86X40 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
LRRC28Q86X40 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
LRRC28Q86X40 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
LRRC28Q86X40 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LRRC28Q86X40 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LRRC28Q86X40 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LRRC28Q86X40 AP005432.1-201ENST00000580891 3485 ntBASIC4.85□□□□□ -1.63
LRRC28Q86X40 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LRRC28Q86X40 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LRRC28Q86X40 AC092642.1-201ENST00000392417 425 ntBASIC4.85□□□□□ -1.63
LRRC28Q86X40 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.85□□□□□ -1.63
LRRC28Q86X40 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC4.85□□□□□ -1.63
LRRC28Q86X40 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC4.85□□□□□ -1.63
LRRC28Q86X40 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LRRC28Q86X40 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.85□□□□□ -1.63
LRRC28Q86X40 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.85□□□□□ -1.63
LRRC28Q86X40 RPL36AP39-201ENST00000445859 318 ntBASIC4.85□□□□□ -1.63
LRRC28Q86X40 AC073909.1-201ENST00000447112 999 ntBASIC4.85□□□□□ -1.63
LRRC28Q86X40 AC022215.1-201ENST00000481770 362 ntBASIC4.85□□□□□ -1.63
LRRC28Q86X40 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC4.85□□□□□ -1.63
LRRC28Q86X40 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.85□□□□□ -1.63
LRRC28Q86X40 SCARNA6.1-201ENST00000516989 238 ntBASIC4.85□□□□□ -1.63
LRRC28Q86X40 AC021678.3-201ENST00000517893 476 ntBASIC4.85□□□□□ -1.63
LRRC28Q86X40 AC112191.2-201ENST00000522428 333 ntBASIC4.85□□□□□ -1.63
LRRC28Q86X40 AC027369.5-201ENST00000533838 755 ntBASIC4.85□□□□□ -1.63
LRRC28Q86X40 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.85□□□□□ -1.63
LRRC28Q86X40 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.85□□□□□ -1.63
LRRC28Q86X40 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC4.85□□□□□ -1.63
LRRC28Q86X40 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.85□□□□□ -1.63
LRRC28Q86X40 IGBP1P1-201ENST00000554337 1009 ntBASIC4.85□□□□□ -1.63
LRRC28Q86X40 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.85□□□□□ -1.63
LRRC28Q86X40 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LRRC28Q86X40 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.85□□□□□ -1.63
LRRC28Q86X40 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC4.85□□□□□ -1.63
LRRC28Q86X40 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC4.85□□□□□ -1.63
LRRC28Q86X40 AP005262.1-201ENST00000582646 997 ntBASIC4.85□□□□□ -1.63
LRRC28Q86X40 MIR3936-201ENST00000584304 110 ntBASIC4.85□□□□□ -1.63
LRRC28Q86X40 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC4.85□□□□□ -1.63
LRRC28Q86X40 AC108738.1-201ENST00000603703 237 ntBASIC4.85□□□□□ -1.63
LRRC28Q86X40 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LRRC28Q86X40 AC022919.1-201ENST00000624979 626 ntBASIC4.85□□□□□ -1.63
LRRC28Q86X40 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
LRRC28Q86X40 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
LRRC28Q86X40 SMG1P4-204ENST00000523028 4131 ntBASIC4.85□□□□□ -1.63
LRRC28Q86X40 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LRRC28Q86X40 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LRRC28Q86X40 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC4.85□□□□□ -1.63
LRRC28Q86X40 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.85□□□□□ -1.63
LRRC28Q86X40 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
LRRC28Q86X40 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
LRRC28Q86X40 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LRRC28Q86X40 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
LRRC28Q86X40 PCAT14-202ENST00000627127 3935 ntBASIC4.85□□□□□ -1.63
LRRC28Q86X40 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
LRRC28Q86X40 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LRRC28Q86X40 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LRRC28Q86X40 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
LRRC28Q86X40 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.84□□□□□ -1.63
LRRC28Q86X40 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LRRC28Q86X40 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LRRC28Q86X40 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
LRRC28Q86X40 RNA5SP394-201ENST00000364216 119 ntBASIC4.84□□□□□ -1.63
LRRC28Q86X40 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
LRRC28Q86X40 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.84□□□□□ -1.63
LRRC28Q86X40 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.84□□□□□ -1.63
LRRC28Q86X40 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
LRRC28Q86X40 HMGB1P20-201ENST00000402555 677 ntBASIC4.84□□□□□ -1.63
LRRC28Q86X40 RN7SKP206-201ENST00000410823 293 ntBASIC4.84□□□□□ -1.63
LRRC28Q86X40 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.84□□□□□ -1.63
LRRC28Q86X40 AC127526.2-201ENST00000426436 775 ntBASIC4.84□□□□□ -1.63
LRRC28Q86X40 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC4.84□□□□□ -1.63
LRRC28Q86X40 HMGB3P24-201ENST00000433260 622 ntBASIC4.84□□□□□ -1.63
LRRC28Q86X40 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.84□□□□□ -1.63
LRRC28Q86X40 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.84□□□□□ -1.63
LRRC28Q86X40 RPSAP37-201ENST00000470913 821 ntBASIC4.84□□□□□ -1.63
LRRC28Q86X40 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC4.84□□□□□ -1.63
LRRC28Q86X40 RN7SL570P-201ENST00000484405 292 ntBASIC4.84□□□□□ -1.63
LRRC28Q86X40 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.84□□□□□ -1.63
LRRC28Q86X40 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.84□□□□□ -1.63
LRRC28Q86X40 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC4.84□□□□□ -1.63
LRRC28Q86X40 IMPA1P1-201ENST00000510718 842 ntBASIC4.84□□□□□ -1.63
LRRC28Q86X40 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.84□□□□□ -1.63
LRRC28Q86X40 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.84□□□□□ -1.63
LRRC28Q86X40 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.84□□□□□ -1.63
LRRC28Q86X40 IGLV3-30-201ENST00000524362 298 ntBASIC4.84□□□□□ -1.63
LRRC28Q86X40 AC130364.2-201ENST00000528639 604 ntBASIC4.84□□□□□ -1.63
LRRC28Q86X40 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.84□□□□□ -1.63
LRRC28Q86X40 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC4.84□□□□□ -1.63
LRRC28Q86X40 AC012146.2-201ENST00000576545 416 ntBASIC4.84□□□□□ -1.63
LRRC28Q86X40 H3F3BP2-201ENST00000583907 357 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms