Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
AP3S2P59780 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
AP3S2P59780 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
AP3S2P59780 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.62□□□□□ -1.67
AP3S2P59780 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
AP3S2P59780 PDZK1P1-202ENST00000425209 1350 ntBASIC4.62□□□□□ -1.67
AP3S2P59780 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC4.62□□□□□ -1.67
AP3S2P59780 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
AP3S2P59780 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
AP3S2P59780 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
AP3S2P59780 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
AP3S2P59780 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
AP3S2P59780 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.61□□□□□ -1.67
AP3S2P59780 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.61□□□□□ -1.67
AP3S2P59780 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.61□□□□□ -1.67
AP3S2P59780 LINC01613-201ENST00000561476 2780 ntBASIC4.61□□□□□ -1.67
AP3S2P59780 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.61□□□□□ -1.67
AP3S2P59780 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
AP3S2P59780 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
AP3S2P59780 WFDC10B-202ENST00000335769 475 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
AP3S2P59780 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC4.61□□□□□ -1.67
AP3S2P59780 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC4.61□□□□□ -1.67
AP3S2P59780 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
AP3S2P59780 UBBP2-201ENST00000376781 231 ntBASIC4.61□□□□□ -1.67
AP3S2P59780 AC005522.1-201ENST00000395416 346 ntBASIC4.61□□□□□ -1.67
AP3S2P59780 AC013442.1-201ENST00000397347 228 ntBASIC4.61□□□□□ -1.67
AP3S2P59780 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
AP3S2P59780 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.61□□□□□ -1.67
AP3S2P59780 RPL36AP10-201ENST00000421785 322 ntBASIC4.61□□□□□ -1.67
AP3S2P59780 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.61□□□□□ -1.67
AP3S2P59780 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.61□□□□□ -1.67
AP3S2P59780 AC128677.1-201ENST00000436016 442 ntBASIC4.61□□□□□ -1.67
AP3S2P59780 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC4.61□□□□□ -1.67
AP3S2P59780 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC4.61□□□□□ -1.67
AP3S2P59780 MRPL35P2-201ENST00000448009 511 ntBASIC4.61□□□□□ -1.67
AP3S2P59780 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
AP3S2P59780 EIF3LP2-201ENST00000457262 807 ntBASIC4.61□□□□□ -1.67
AP3S2P59780 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.61□□□□□ -1.67
AP3S2P59780 RPL32P33-201ENST00000487023 394 ntBASIC4.61□□□□□ -1.67
AP3S2P59780 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
AP3S2P59780 AC108103.1-201ENST00000511286 446 ntBASIC4.61□□□□□ -1.67
AP3S2P59780 ZNF519P4-201ENST00000514008 125 ntBASIC4.61□□□□□ -1.67
AP3S2P59780 RNA5SP303-201ENST00000516192 130 ntBASIC4.61□□□□□ -1.67
AP3S2P59780 WBP1LP3-201ENST00000523033 208 ntBASIC4.61□□□□□ -1.67
AP3S2P59780 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC4.61□□□□□ -1.67
AP3S2P59780 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.61□□□□□ -1.67
AP3S2P59780 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC4.61□□□□□ -1.67
AP3S2P59780 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.61□□□□□ -1.67
AP3S2P59780 MIR4776-2-201ENST00000580204 80 ntBASIC4.61□□□□□ -1.67
AP3S2P59780 AC068768.2-201ENST00000602352 343 ntBASIC4.61□□□□□ -1.67
AP3S2P59780 AC009027.1-201ENST00000604510 479 ntBASIC4.61□□□□□ -1.67
AP3S2P59780 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
AP3S2P59780 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.61□□□□□ -1.67
AP3S2P59780 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
AP3S2P59780 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.61□□□□□ -1.67
AP3S2P59780 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
AP3S2P59780 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.61□□□□□ -1.67
AP3S2P59780 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
AP3S2P59780 AC107027.3-201ENST00000565095 3473 ntBASIC4.61□□□□□ -1.67
AP3S2P59780 AC107068.1-201ENST00000563286 4218 ntBASIC4.61□□□□□ -1.67
AP3S2P59780 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
AP3S2P59780 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
AP3S2P59780 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
AP3S2P59780 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.61□□□□□ -1.67
AP3S2P59780 AC008627.1-201ENST00000517511 1704 ntBASIC4.6□□□□□ -1.67
AP3S2P59780 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.6□□□□□ -1.67
AP3S2P59780 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
AP3S2P59780 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
AP3S2P59780 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
AP3S2P59780 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
AP3S2P59780 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
AP3S2P59780 AC027290.2-201ENST00000623210 18662 ntBASIC4.6□□□□□ -1.67
AP3S2P59780 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.6□□□□□ -1.67
AP3S2P59780 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
AP3S2P59780 AL159987.1-201ENST00000347911 293 ntBASIC4.6□□□□□ -1.67
AP3S2P59780 RNA5SP110-201ENST00000362638 115 ntBASIC4.6□□□□□ -1.67
AP3S2P59780 RNA5SP223-201ENST00000365174 120 ntBASIC4.6□□□□□ -1.67
AP3S2P59780 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
AP3S2P59780 RN7SKP108-201ENST00000411367 328 ntBASIC4.6□□□□□ -1.67
AP3S2P59780 NENFP1-201ENST00000419476 466 ntBASIC4.6□□□□□ -1.67
AP3S2P59780 RPL12P17-201ENST00000432393 498 ntBASIC4.6□□□□□ -1.67
AP3S2P59780 AC092447.2-201ENST00000435487 669 ntBASIC4.6□□□□□ -1.67
AP3S2P59780 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.6□□□□□ -1.67
AP3S2P59780 AC023141.3-201ENST00000436698 278 ntBASIC4.6□□□□□ -1.67
AP3S2P59780 SLC8A1-AS1-207ENST00000444629 935 ntTSL 3 BASIC4.6□□□□□ -1.67
AP3S2P59780 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC4.6□□□□□ -1.67
AP3S2P59780 PTMAP3-201ENST00000447474 330 ntBASIC4.6□□□□□ -1.67
AP3S2P59780 AC005077.1-201ENST00000449226 375 ntBASIC4.6□□□□□ -1.67
AP3S2P59780 PPIAP32-201ENST00000449940 472 ntBASIC4.6□□□□□ -1.67
AP3S2P59780 DNAJB5P1-201ENST00000454004 806 ntBASIC4.6□□□□□ -1.67
AP3S2P59780 AL354872.1-201ENST00000456361 967 ntBASIC4.6□□□□□ -1.67
AP3S2P59780 CYCSP34-201ENST00000458172 304 ntBASIC4.6□□□□□ -1.67
AP3S2P59780 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.6□□□□□ -1.67
AP3S2P59780 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.6□□□□□ -1.67
AP3S2P59780 AC093827.1-201ENST00000480094 861 ntBASIC4.6□□□□□ -1.67
AP3S2P59780 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC4.6□□□□□ -1.67
AP3S2P59780 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.6□□□□□ -1.67
AP3S2P59780 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC4.6□□□□□ -1.67
AP3S2P59780 RPL15P21-201ENST00000495592 567 ntBASIC4.6□□□□□ -1.67
AP3S2P59780 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms