Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NEK3P51956 AP003476.1-201ENST00000623984 516 ntBASIC6.21□□□□□ -1.42
NEK3P51956 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NEK3P51956 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NEK3P51956 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
NEK3P51956 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NEK3P51956 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NEK3P51956 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NEK3P51956 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NEK3P51956 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
NEK3P51956 MFSD8-213ENST00000641134 1327 ntBASIC6.21□□□□□ -1.42
NEK3P51956 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.21□□□□□ -1.42
NEK3P51956 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NEK3P51956 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.2□□□□□ -1.42
NEK3P51956 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
NEK3P51956 HSPA8P19-201ENST00000505359 1517 ntBASIC6.2□□□□□ -1.42
NEK3P51956 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NEK3P51956 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.2□□□□□ -1.42
NEK3P51956 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NEK3P51956 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.2□□□□□ -1.42
NEK3P51956 AC025470.1-201ENST00000510053 2032 ntBASIC6.2□□□□□ -1.42
NEK3P51956 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
NEK3P51956 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NEK3P51956 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NEK3P51956 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC6.2□□□□□ -1.42
NEK3P51956 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NEK3P51956 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.2□□□□□ -1.42
NEK3P51956 RNU6-452P-201ENST00000384406 107 ntBASIC6.2□□□□□ -1.42
NEK3P51956 MIR620-201ENST00000385232 95 ntBASIC6.2□□□□□ -1.42
NEK3P51956 RNU6-244P-201ENST00000391028 104 ntBASIC6.2□□□□□ -1.42
NEK3P51956 AP002784.2-201ENST00000397300 549 ntBASIC6.2□□□□□ -1.42
NEK3P51956 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NEK3P51956 AP000357.1-201ENST00000409926 1165 ntBASIC6.2□□□□□ -1.42
NEK3P51956 AC010385.1-201ENST00000412374 256 ntBASIC6.2□□□□□ -1.42
NEK3P51956 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.2□□□□□ -1.42
NEK3P51956 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.2□□□□□ -1.42
NEK3P51956 LINC01347-201ENST00000417964 355 ntBASIC6.2□□□□□ -1.42
NEK3P51956 RPL35AP31-201ENST00000418340 337 ntBASIC6.2□□□□□ -1.42
NEK3P51956 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.2□□□□□ -1.42
NEK3P51956 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NEK3P51956 FO393419.3-201ENST00000428741 282 ntBASIC6.2□□□□□ -1.42
NEK3P51956 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
NEK3P51956 DNAJA1P5-201ENST00000440278 943 ntBASIC6.2□□□□□ -1.42
NEK3P51956 ATP5LP2-201ENST00000440646 311 ntBASIC6.2□□□□□ -1.42
NEK3P51956 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NEK3P51956 AL096829.2-201ENST00000446582 742 ntBASIC6.2□□□□□ -1.42
NEK3P51956 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NEK3P51956 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NEK3P51956 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC6.2□□□□□ -1.42
NEK3P51956 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.2□□□□□ -1.42
NEK3P51956 AC144530.1-201ENST00000452862 555 ntBASIC6.2□□□□□ -1.42
NEK3P51956 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.2□□□□□ -1.42
NEK3P51956 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NEK3P51956 AC090058.1-201ENST00000498788 435 ntBASIC6.2□□□□□ -1.42
NEK3P51956 OR5H3P-201ENST00000502817 919 ntBASIC6.2□□□□□ -1.42
NEK3P51956 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC6.2□□□□□ -1.42
NEK3P51956 RFESD-208ENST00000513950 464 ntTSL 5 BASIC6.2□□□□□ -1.42
NEK3P51956 RNA5SP434-201ENST00000516647 121 ntBASIC6.2□□□□□ -1.42
NEK3P51956 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NEK3P51956 IGKV2-4-201ENST00000523070 340 ntBASIC6.2□□□□□ -1.42
NEK3P51956 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.2□□□□□ -1.42
NEK3P51956 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NEK3P51956 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.2□□□□□ -1.42
NEK3P51956 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.2□□□□□ -1.42
NEK3P51956 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NEK3P51956 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.2□□□□□ -1.42
NEK3P51956 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.2□□□□□ -1.42
NEK3P51956 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.2□□□□□ -1.42
NEK3P51956 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC6.2□□□□□ -1.42
NEK3P51956 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.2□□□□□ -1.42
NEK3P51956 AC068768.2-201ENST00000602352 343 ntBASIC6.2□□□□□ -1.42
NEK3P51956 AC125494.2-201ENST00000602431 657 ntBASIC6.2□□□□□ -1.42
NEK3P51956 AC245100.7-201ENST00000609678 442 ntBASIC6.2□□□□□ -1.42
NEK3P51956 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC6.2□□□□□ -1.42
NEK3P51956 AC024884.1-201ENST00000620583 399 ntBASIC6.2□□□□□ -1.42
NEK3P51956 AL590396.2-201ENST00000636511 1041 ntBASIC6.2□□□□□ -1.42
NEK3P51956 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
NEK3P51956 AC232271.1-201ENST00000602455 2715 ntBASIC6.2□□□□□ -1.42
NEK3P51956 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
NEK3P51956 KYNUP3-201ENST00000574386 1341 ntBASIC6.2□□□□□ -1.42
NEK3P51956 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
NEK3P51956 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
NEK3P51956 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NEK3P51956 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
NEK3P51956 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
NEK3P51956 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NEK3P51956 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.19□□□□□ -1.42
NEK3P51956 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.19□□□□□ -1.42
NEK3P51956 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
NEK3P51956 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.19□□□□□ -1.42
NEK3P51956 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.19□□□□□ -1.42
NEK3P51956 AC097063.1-201ENST00000426714 1797 ntBASIC6.19□□□□□ -1.42
NEK3P51956 NLRP3P1-201ENST00000622303 1785 ntBASIC6.19□□□□□ -1.42
NEK3P51956 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
NEK3P51956 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NEK3P51956 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
NEK3P51956 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
NEK3P51956 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
NEK3P51956 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NEK3P51956 SNORD1C-201ENST00000363315 78 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms