Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 RN7SL244P-201ENST00000493405 297 ntBASIC5.56□□□□□ -1.52
BRCA2P51587 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.56□□□□□ -1.52
BRCA2P51587 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.56□□□□□ -1.52
BRCA2P51587 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.56□□□□□ -1.52
BRCA2P51587 AC115286.1-201ENST00000604298 434 ntBASIC5.56□□□□□ -1.52
BRCA2P51587 AC099676.1-201ENST00000608886 657 ntBASIC5.56□□□□□ -1.52
BRCA2P51587 AC018816.2-201ENST00000621460 353 ntBASIC5.56□□□□□ -1.52
BRCA2P51587 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.56□□□□□ -1.52
BRCA2P51587 CENPC-201ENST00000273853 6940 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
BRCA2P51587 PBRM1-208ENST00000410007 4905 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
BRCA2P51587 TRANK1-201ENST00000429976 10481 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
BRCA2P51587 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
BRCA2P51587 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC5.56□□□□□ -1.52
BRCA2P51587 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
BRCA2P51587 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
BRCA2P51587 AL021331.1-201ENST00000402817 582 ntBASIC5.56□□□□□ -1.52
BRCA2P51587 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
BRCA2P51587 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC5.56□□□□□ -1.52
BRCA2P51587 EGFR-201ENST00000275493 9821 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
BRCA2P51587 SMG1P7-201ENST00000565246 2704 ntBASIC5.55□□□□□ -1.52
BRCA2P51587 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.55□□□□□ -1.52
BRCA2P51587 FBXL20-201ENST00000264658 10388 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
BRCA2P51587 AC091390.3-201ENST00000426478 338 ntBASIC5.55□□□□□ -1.52
BRCA2P51587 GCA-203ENST00000429691 824 ntTSL 3 BASIC5.55□□□□□ -1.52
BRCA2P51587 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.55□□□□□ -1.52
BRCA2P51587 AC114755.5-201ENST00000447760 831 ntBASIC5.55□□□□□ -1.52
BRCA2P51587 SCARNA10-201ENST00000459255 330 ntBASIC5.55□□□□□ -1.52
BRCA2P51587 MIR3939-201ENST00000582614 106 ntBASIC5.55□□□□□ -1.52
BRCA2P51587 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.55□□□□□ -1.52
BRCA2P51587 AC119674.1-213ENST00000641177 1386 ntBASIC5.55□□□□□ -1.52
BRCA2P51587 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.55□□□□□ -1.52
BRCA2P51587 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
BRCA2P51587 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
BRCA2P51587 EEA1-201ENST00000322349 9875 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
BRCA2P51587 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.55□□□□□ -1.52
BRCA2P51587 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.55□□□□□ -1.52
BRCA2P51587 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.55□□□□□ -1.52
BRCA2P51587 ATP5F1P2-201ENST00000398143 760 ntBASIC5.55□□□□□ -1.52
BRCA2P51587 AMZ2P2-201ENST00000406819 1057 ntBASIC5.55□□□□□ -1.52
BRCA2P51587 RNA5SP251-201ENST00000410614 137 ntBASIC5.55□□□□□ -1.52
BRCA2P51587 AC012400.1-201ENST00000518452 381 ntBASIC5.55□□□□□ -1.52
BRCA2P51587 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.55□□□□□ -1.52
BRCA2P51587 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.55□□□□□ -1.52
BRCA2P51587 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.55□□□□□ -1.52
BRCA2P51587 AL138960.1-201ENST00000613838 513 ntBASIC5.55□□□□□ -1.52
BRCA2P51587 AL035461.2-201ENST00000619201 524 ntBASIC5.55□□□□□ -1.52
BRCA2P51587 AC138907.8-201ENST00000623981 2256 ntBASIC5.55□□□□□ -1.52
BRCA2P51587 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
BRCA2P51587 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.55□□□□□ -1.52
BRCA2P51587 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC5.55□□□□□ -1.52
BRCA2P51587 AGAP1-212ENST00000614409 9932 ntTSL 5 BASIC5.55□□□□□ -1.52
BRCA2P51587 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
BRCA2P51587 CYCSP10-201ENST00000417973 294 ntBASIC5.55□□□□□ -1.52
BRCA2P51587 BX323845.1-201ENST00000432417 179 ntBASIC5.55□□□□□ -1.52
BRCA2P51587 NRBF2P3-201ENST00000432731 865 ntBASIC5.55□□□□□ -1.52
BRCA2P51587 AC073358.1-201ENST00000505671 684 ntBASIC5.55□□□□□ -1.52
BRCA2P51587 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC5.55□□□□□ -1.52
BRCA2P51587 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
BRCA2P51587 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.55□□□□□ -1.52
BRCA2P51587 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
BRCA2P51587 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.55□□□□□ -1.52
BRCA2P51587 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
BRCA2P51587 CSMD1-202ENST00000400186 10938 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
BRCA2P51587 CSMD1-217ENST00000602723 10938 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
BRCA2P51587 BACH2-201ENST00000257749 9113 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
BRCA2P51587 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.55□□□□□ -1.52
BRCA2P51587 ACACB-201ENST00000338432 9360 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
BRCA2P51587 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.54□□□□□ -1.52
BRCA2P51587 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
BRCA2P51587 AC079298.1-201ENST00000625026 1619 ntBASIC5.54□□□□□ -1.52
BRCA2P51587 SEC16A-203ENST00000313050 8806 ntAPPRIS P3 TSL 2 BASIC5.54□□□□□ -1.52
BRCA2P51587 SLC7A2-201ENST00000004531 7560 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
BRCA2P51587 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
BRCA2P51587 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
BRCA2P51587 SNORA66-201ENST00000384792 133 ntBASIC5.54□□□□□ -1.52
BRCA2P51587 MIR298-201ENST00000401212 88 ntBASIC5.54□□□□□ -1.52
BRCA2P51587 CEACAMP8-201ENST00000413902 580 ntBASIC5.54□□□□□ -1.52
BRCA2P51587 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.54□□□□□ -1.52
BRCA2P51587 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC5.54□□□□□ -1.52
BRCA2P51587 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.54□□□□□ -1.52
BRCA2P51587 AC019322.1-201ENST00000571869 389 ntBASIC5.54□□□□□ -1.52
BRCA2P51587 AC017100.2-201ENST00000584628 355 ntBASIC5.54□□□□□ -1.52
BRCA2P51587 EIF1P5-201ENST00000585002 234 ntBASIC5.54□□□□□ -1.52
BRCA2P51587 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
BRCA2P51587 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
BRCA2P51587 AC104964.2-201ENST00000562242 4641 ntBASIC5.54□□□□□ -1.52
BRCA2P51587 CADM1-203ENST00000452722 8588 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
BRCA2P51587 GPR155-203ENST00000392552 6730 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
BRCA2P51587 SVIL-202ENST00000375398 8201 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
BRCA2P51587 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
BRCA2P51587 AC018628.1-201ENST00000624147 3819 ntBASIC5.54□□□□□ -1.52
BRCA2P51587 SETBP1-201ENST00000282030 9899 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
BRCA2P51587 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
BRCA2P51587 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.54□□□□□ -1.52
BRCA2P51587 NOP56P2-201ENST00000447491 769 ntBASIC5.54□□□□□ -1.52
BRCA2P51587 IGHV5-78-201ENST00000450948 295 ntBASIC5.54□□□□□ -1.52
BRCA2P51587 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.54□□□□□ -1.52
BRCA2P51587 AC093827.1-201ENST00000480094 861 ntBASIC5.54□□□□□ -1.52
BRCA2P51587 SLC25A14P1-201ENST00000502867 901 ntBASIC5.54□□□□□ -1.52
BRCA2P51587 AC002044.3-201ENST00000623314 541 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms