Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AAMDC-202ENST00000393427 531 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RNF144AP50876 DNAJA1P4-201ENST00000406473 1166 ntBASIC7.16□□□□□ -1.26
RNF144AP50876 RN7SKP32-201ENST00000410167 303 ntBASIC7.16□□□□□ -1.26
RNF144AP50876 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC7.16□□□□□ -1.26
RNF144AP50876 OR9R1P-201ENST00000412200 877 ntBASIC7.16□□□□□ -1.26
RNF144AP50876 CTSLP8-201ENST00000413075 967 ntBASIC7.16□□□□□ -1.26
RNF144AP50876 TRBV30-201ENST00000417977 447 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
RNF144AP50876 AL353678.1-201ENST00000422735 741 ntBASIC7.16□□□□□ -1.26
RNF144AP50876 RPL35AP12-201ENST00000425362 338 ntBASIC7.16□□□□□ -1.26
RNF144AP50876 TRBV10-2-201ENST00000426318 395 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
RNF144AP50876 KRT18P53-201ENST00000431919 117 ntBASIC7.16□□□□□ -1.26
RNF144AP50876 ANKRD54P1-201ENST00000433115 471 ntBASIC7.16□□□□□ -1.26
RNF144AP50876 LYSMD1-202ENST00000440902 1003 ntTSL 2 BASIC7.16□□□□□ -1.26
RNF144AP50876 RPL7P12-201ENST00000446719 750 ntBASIC7.16□□□□□ -1.26
RNF144AP50876 OR7E102P-201ENST00000448855 1015 ntBASIC7.16□□□□□ -1.26
RNF144AP50876 AC080129.1-201ENST00000457815 406 ntTSL 3 BASIC7.16□□□□□ -1.26
RNF144AP50876 RNU6-420P-201ENST00000458780 107 ntBASIC7.16□□□□□ -1.26
RNF144AP50876 AC099521.1-201ENST00000482557 334 ntBASIC7.16□□□□□ -1.26
RNF144AP50876 AC111198.1-201ENST00000505575 606 ntTSL 4 BASIC7.16□□□□□ -1.26
RNF144AP50876 RNU7-30P-201ENST00000516835 62 ntBASIC7.16□□□□□ -1.26
RNF144AP50876 RN7SKP2-201ENST00000517003 319 ntBASIC7.16□□□□□ -1.26
RNF144AP50876 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC7.16□□□□□ -1.26
RNF144AP50876 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC7.16□□□□□ -1.26
RNF144AP50876 RAB30-205ENST00000527633 792 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RNF144AP50876 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC7.16□□□□□ -1.26
RNF144AP50876 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC7.16□□□□□ -1.26
RNF144AP50876 AC055736.1-201ENST00000548135 629 ntTSL 3 BASIC7.16□□□□□ -1.26
RNF144AP50876 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
RNF144AP50876 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC7.16□□□□□ -1.26
RNF144AP50876 AC026470.2-201ENST00000561492 181 ntBASIC7.16□□□□□ -1.26
RNF144AP50876 OR1P1-201ENST00000571766 994 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
RNF144AP50876 AC007861.1-201ENST00000576671 674 ntTSL 5 BASIC7.16□□□□□ -1.26
RNF144AP50876 STARD6-204ENST00000584040 660 ntTSL 3 BASIC7.16□□□□□ -1.26
RNF144AP50876 NRBF2P1-201ENST00000587407 859 ntBASIC7.16□□□□□ -1.26
RNF144AP50876 PRR13P5-201ENST00000596581 442 ntBASIC7.16□□□□□ -1.26
RNF144AP50876 AC140658.6-201ENST00000603958 201 ntBASIC7.16□□□□□ -1.26
RNF144AP50876 AC004853.1-201ENST00000604902 698 ntBASIC7.16□□□□□ -1.26
RNF144AP50876 AC010680.4-201ENST00000605334 543 ntBASIC7.16□□□□□ -1.26
RNF144AP50876 RN7SL3-201ENST00000610674 299 ntBASIC7.16□□□□□ -1.26
RNF144AP50876 AL451054.3-201ENST00000611115 776 ntBASIC7.16□□□□□ -1.26
RNF144AP50876 RNVU1-19-201ENST00000613023 167 ntBASIC7.16□□□□□ -1.26
RNF144AP50876 AC245028.3-201ENST00000618197 285 ntBASIC7.16□□□□□ -1.26
RNF144AP50876 AC012557.3-201ENST00000626439 255 ntBASIC7.16□□□□□ -1.26
RNF144AP50876 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
RNF144AP50876 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
RNF144AP50876 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
RNF144AP50876 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RNF144AP50876 AC022784.6-204ENST00000520390 3442 ntTSL 2 BASIC7.16□□□□□ -1.26
RNF144AP50876 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
RNF144AP50876 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RNF144AP50876 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RNF144AP50876 AC068860.1-201ENST00000623701 3736 ntBASIC7.16□□□□□ -1.26
RNF144AP50876 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RNF144AP50876 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC7.16□□□□□ -1.26
RNF144AP50876 PRKCQ-204ENST00000610727 3077 ntTSL 5 BASIC7.16□□□□□ -1.26
RNF144AP50876 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RNF144AP50876 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC7.16□□□□□ -1.26
RNF144AP50876 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC7.16□□□□□ -1.26
RNF144AP50876 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
RNF144AP50876 IFI44-201ENST00000370747 1687 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RNF144AP50876 AC003985.2-201ENST00000562268 1669 ntBASIC7.16□□□□□ -1.26
RNF144AP50876 PYHIN1-202ENST00000368138 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
RNF144AP50876 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC7.15□□□□□ -1.26
RNF144AP50876 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC7.15□□□□□ -1.26
RNF144AP50876 AL118496.1-201ENST00000440201 1812 ntBASIC7.15□□□□□ -1.26
RNF144AP50876 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC7.15□□□□□ -1.26
RNF144AP50876 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC7.15□□□□□ -1.26
RNF144AP50876 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC7.15□□□□□ -1.26
RNF144AP50876 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC7.15□□□□□ -1.26
RNF144AP50876 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
RNF144AP50876 HLF-210ENST00000575345 3589 ntTSL 2 BASIC7.15□□□□□ -1.26
RNF144AP50876 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC7.15□□□□□ -1.26
RNF144AP50876 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC7.15□□□□□ -1.26
RNF144AP50876 ORM1-201ENST00000259396 802 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
RNF144AP50876 RNU6-1066P-201ENST00000363573 105 ntBASIC7.15□□□□□ -1.26
RNF144AP50876 Y_RNA.157-201ENST00000363638 102 ntBASIC7.15□□□□□ -1.26
RNF144AP50876 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC7.15□□□□□ -1.26
RNF144AP50876 PDHA1-202ENST00000379804 709 ntTSL 2 BASIC7.15□□□□□ -1.26
RNF144AP50876 RNU6-574P-201ENST00000384265 107 ntBASIC7.15□□□□□ -1.26
RNF144AP50876 RNU6-452P-201ENST00000384406 107 ntBASIC7.15□□□□□ -1.26
RNF144AP50876 TRBV5-3-201ENST00000390362 343 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
RNF144AP50876 PKMP3-201ENST00000405497 715 ntBASIC7.15□□□□□ -1.26
RNF144AP50876 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
RNF144AP50876 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC7.15□□□□□ -1.26
RNF144AP50876 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC7.15□□□□□ -1.26
RNF144AP50876 AC062016.2-201ENST00000420950 676 ntBASIC7.15□□□□□ -1.26
RNF144AP50876 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC7.15□□□□□ -1.26
RNF144AP50876 OR2B7P-201ENST00000429302 934 ntBASIC7.15□□□□□ -1.26
RNF144AP50876 SKP1P1-201ENST00000438081 489 ntBASIC7.15□□□□□ -1.26
RNF144AP50876 RPSAP40-201ENST00000442343 891 ntBASIC7.15□□□□□ -1.26
RNF144AP50876 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
RNF144AP50876 Y_RNA.632-201ENST00000459189 102 ntBASIC7.15□□□□□ -1.26
RNF144AP50876 RN7SL870P-201ENST00000460111 296 ntBASIC7.15□□□□□ -1.26
RNF144AP50876 RN7SL263P-201ENST00000467969 290 ntBASIC7.15□□□□□ -1.26
RNF144AP50876 AC021146.2-201ENST00000504736 556 ntBASIC7.15□□□□□ -1.26
RNF144AP50876 AC103851.1-201ENST00000506833 274 ntBASIC7.15□□□□□ -1.26
RNF144AP50876 BTG4P1-201ENST00000510421 183 ntBASIC7.15□□□□□ -1.26
RNF144AP50876 AC008429.2-201ENST00000523057 864 ntBASIC7.15□□□□□ -1.26
RNF144AP50876 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC7.15□□□□□ -1.26
RNF144AP50876 HIGD1AP9-201ENST00000550710 279 ntBASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms