Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
EPHA3P29320 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
EPHA3P29320 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
EPHA3P29320 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.72□□□□□ -1.49
EPHA3P29320 AC092111.2-201ENST00000611627 1414 ntBASIC5.72□□□□□ -1.49
EPHA3P29320 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
EPHA3P29320 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.72□□□□□ -1.49
EPHA3P29320 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
EPHA3P29320 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.72□□□□□ -1.49
EPHA3P29320 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
EPHA3P29320 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
EPHA3P29320 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
EPHA3P29320 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
EPHA3P29320 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.72□□□□□ -1.49
EPHA3P29320 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
EPHA3P29320 ICE2P1-201ENST00000512800 1849 ntBASIC5.71□□□□□ -1.49
EPHA3P29320 AP005435.3-201ENST00000531260 3198 ntBASIC5.71□□□□□ -1.49
EPHA3P29320 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.49
EPHA3P29320 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
EPHA3P29320 MFSD8-239ENST00000641590 2479 ntBASIC5.71□□□□□ -1.49
EPHA3P29320 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
EPHA3P29320 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.71□□□□□ -1.5
EPHA3P29320 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
EPHA3P29320 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
EPHA3P29320 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.71□□□□□ -1.5
EPHA3P29320 PCF11-AS1-201ENST00000602322 1516 ntBASIC5.71□□□□□ -1.5
EPHA3P29320 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
EPHA3P29320 RN7SKP78-201ENST00000364711 318 ntBASIC5.71□□□□□ -1.5
EPHA3P29320 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC5.71□□□□□ -1.5
EPHA3P29320 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.71□□□□□ -1.5
EPHA3P29320 RPL11P3-201ENST00000395256 523 ntBASIC5.71□□□□□ -1.5
EPHA3P29320 HMGB1P10-201ENST00000395823 563 ntBASIC5.71□□□□□ -1.5
EPHA3P29320 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
EPHA3P29320 AP002784.2-201ENST00000397300 549 ntBASIC5.71□□□□□ -1.5
EPHA3P29320 ARSFP1-201ENST00000398758 477 ntBASIC5.71□□□□□ -1.5
EPHA3P29320 AL132875.1-201ENST00000403623 949 ntBASIC5.71□□□□□ -1.5
EPHA3P29320 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
EPHA3P29320 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC5.71□□□□□ -1.5
EPHA3P29320 Z68694.1-201ENST00000413929 841 ntBASIC5.71□□□□□ -1.5
EPHA3P29320 AL034379.1-201ENST00000423216 253 ntBASIC5.71□□□□□ -1.5
EPHA3P29320 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC5.71□□□□□ -1.5
EPHA3P29320 AC093422.3-201ENST00000428506 305 ntBASIC5.71□□□□□ -1.5
EPHA3P29320 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC5.71□□□□□ -1.5
EPHA3P29320 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.71□□□□□ -1.5
EPHA3P29320 PSMD8P1-201ENST00000436275 769 ntBASIC5.71□□□□□ -1.5
EPHA3P29320 MTCYBP29-201ENST00000436327 1006 ntBASIC5.71□□□□□ -1.5
EPHA3P29320 AC096775.1-201ENST00000437724 448 ntBASIC5.71□□□□□ -1.5
EPHA3P29320 ARMC4P1-201ENST00000438905 707 ntBASIC5.71□□□□□ -1.5
EPHA3P29320 ARF4P4-201ENST00000439608 520 ntBASIC5.71□□□□□ -1.5
EPHA3P29320 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.71□□□□□ -1.5
EPHA3P29320 AL590004.3-202ENST00000445883 451 ntBASIC5.71□□□□□ -1.5
EPHA3P29320 AC020898.1-201ENST00000474167 787 ntBASIC5.71□□□□□ -1.5
EPHA3P29320 AC006539.1-201ENST00000481419 501 ntBASIC5.71□□□□□ -1.5
EPHA3P29320 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
EPHA3P29320 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.71□□□□□ -1.5
EPHA3P29320 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
EPHA3P29320 AC105420.1-201ENST00000504389 582 ntBASIC5.71□□□□□ -1.5
EPHA3P29320 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.71□□□□□ -1.5
EPHA3P29320 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.71□□□□□ -1.5
EPHA3P29320 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.71□□□□□ -1.5
EPHA3P29320 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC5.71□□□□□ -1.5
EPHA3P29320 AC131935.1-201ENST00000524621 333 ntBASIC5.71□□□□□ -1.5
EPHA3P29320 OR8K4P-201ENST00000534608 872 ntBASIC5.71□□□□□ -1.5
EPHA3P29320 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.71□□□□□ -1.5
EPHA3P29320 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.71□□□□□ -1.5
EPHA3P29320 CYB5AP5-201ENST00000549779 389 ntBASIC5.71□□□□□ -1.5
EPHA3P29320 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.71□□□□□ -1.5
EPHA3P29320 MTCYBP23-201ENST00000558717 1102 ntBASIC5.71□□□□□ -1.5
EPHA3P29320 AC090888.2-201ENST00000559765 1144 ntBASIC5.71□□□□□ -1.5
EPHA3P29320 AP005136.2-201ENST00000583253 1049 ntBASIC5.71□□□□□ -1.5
EPHA3P29320 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.71□□□□□ -1.5
EPHA3P29320 SUMO2P14-201ENST00000604488 293 ntBASIC5.71□□□□□ -1.5
EPHA3P29320 AL159169.2-201ENST00000610061 1269 ntBASIC5.71□□□□□ -1.5
EPHA3P29320 RFPL4AP6-201ENST00000616792 846 ntBASIC5.71□□□□□ -1.5
EPHA3P29320 AL445670.1-201ENST00000618889 801 ntBASIC5.71□□□□□ -1.5
EPHA3P29320 AL357562.1-201ENST00000624911 609 ntBASIC5.71□□□□□ -1.5
EPHA3P29320 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC5.71□□□□□ -1.5
EPHA3P29320 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
EPHA3P29320 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
EPHA3P29320 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC5.71□□□□□ -1.5
EPHA3P29320 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
EPHA3P29320 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.71□□□□□ -1.5
EPHA3P29320 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
EPHA3P29320 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
EPHA3P29320 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.71□□□□□ -1.5
EPHA3P29320 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
EPHA3P29320 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.71□□□□□ -1.5
EPHA3P29320 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.71□□□□□ -1.5
EPHA3P29320 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
EPHA3P29320 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.71□□□□□ -1.5
EPHA3P29320 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
EPHA3P29320 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
EPHA3P29320 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
EPHA3P29320 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
EPHA3P29320 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.7□□□□□ -1.5
EPHA3P29320 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
EPHA3P29320 AL121839.2-201ENST00000565058 6943 ntBASIC5.7□□□□□ -1.5
EPHA3P29320 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
EPHA3P29320 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.7□□□□□ -1.5
EPHA3P29320 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms