Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TCRAP04437 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
TCRAP04437 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.04□□□□□ -1.76
TCRAP04437 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TCRAP04437 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.04□□□□□ -1.76
TCRAP04437 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.04□□□□□ -1.76
TCRAP04437 RNU1-65P-201ENST00000363919 148 ntBASIC4.04□□□□□ -1.76
TCRAP04437 RNA5SP223-201ENST00000365174 120 ntBASIC4.04□□□□□ -1.76
TCRAP04437 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC4.04□□□□□ -1.76
TCRAP04437 MIR589-201ENST00000385238 99 ntBASIC4.04□□□□□ -1.76
TCRAP04437 RPL10P10-201ENST00000403509 664 ntBASIC4.04□□□□□ -1.76
TCRAP04437 RPS3AP2-201ENST00000407190 754 ntBASIC4.04□□□□□ -1.76
TCRAP04437 MIR1203-201ENST00000408812 85 ntBASIC4.04□□□□□ -1.76
TCRAP04437 AL359885.1-201ENST00000415786 903 ntBASIC4.04□□□□□ -1.76
TCRAP04437 AL035660.1-201ENST00000422041 222 ntBASIC4.04□□□□□ -1.76
TCRAP04437 NANOGP4-201ENST00000427230 913 ntBASIC4.04□□□□□ -1.76
TCRAP04437 BX323845.3-201ENST00000428215 527 ntBASIC4.04□□□□□ -1.76
TCRAP04437 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.04□□□□□ -1.76
TCRAP04437 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.04□□□□□ -1.76
TCRAP04437 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.04□□□□□ -1.76
TCRAP04437 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
TCRAP04437 AL672138.1-201ENST00000450604 1015 ntBASIC4.04□□□□□ -1.76
TCRAP04437 BX842559.2-201ENST00000451418 605 ntBASIC4.04□□□□□ -1.76
TCRAP04437 RPS23P6-201ENST00000466136 431 ntBASIC4.04□□□□□ -1.76
TCRAP04437 AC090589.1-201ENST00000473109 362 ntBASIC4.04□□□□□ -1.76
TCRAP04437 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
TCRAP04437 LSM3P4-201ENST00000502948 309 ntBASIC4.04□□□□□ -1.76
TCRAP04437 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC4.04□□□□□ -1.76
TCRAP04437 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC4.04□□□□□ -1.76
TCRAP04437 AC018797.1-201ENST00000510791 255 ntBASIC4.04□□□□□ -1.76
TCRAP04437 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC4.04□□□□□ -1.76
TCRAP04437 SNORA70.20-201ENST00000516848 126 ntBASIC4.04□□□□□ -1.76
TCRAP04437 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.04□□□□□ -1.76
TCRAP04437 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.04□□□□□ -1.76
TCRAP04437 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.04□□□□□ -1.76
TCRAP04437 BNIP3P1-201ENST00000547295 580 ntBASIC4.04□□□□□ -1.76
TCRAP04437 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TCRAP04437 CYCSP38-201ENST00000559840 322 ntBASIC4.04□□□□□ -1.76
TCRAP04437 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.04□□□□□ -1.76
TCRAP04437 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC4.04□□□□□ -1.76
TCRAP04437 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.04□□□□□ -1.76
TCRAP04437 AC011500.1-201ENST00000601963 469 ntBASIC4.04□□□□□ -1.76
TCRAP04437 PPATP2-201ENST00000605635 508 ntBASIC4.04□□□□□ -1.76
TCRAP04437 AC005828.7-201ENST00000607331 556 ntBASIC4.04□□□□□ -1.76
TCRAP04437 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC4.04□□□□□ -1.76
TCRAP04437 BX005214.3-202ENST00000619809 325 ntBASIC4.04□□□□□ -1.76
TCRAP04437 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.04□□□□□ -1.76
TCRAP04437 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TCRAP04437 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.04□□□□□ -1.76
TCRAP04437 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
TCRAP04437 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.04□□□□□ -1.76
TCRAP04437 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TCRAP04437 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.04□□□□□ -1.76
TCRAP04437 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.04□□□□□ -1.76
TCRAP04437 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
TCRAP04437 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TCRAP04437 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TCRAP04437 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.03□□□□□ -1.76
TCRAP04437 AL731566.1-201ENST00000620490 1937 ntBASIC4.03□□□□□ -1.76
TCRAP04437 SRRM1P3-201ENST00000426911 2678 ntBASIC4.03□□□□□ -1.76
TCRAP04437 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC4.03□□□□□ -1.76
TCRAP04437 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TCRAP04437 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
TCRAP04437 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.03□□□□□ -1.76
TCRAP04437 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TCRAP04437 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC4.03□□□□□ -1.76
TCRAP04437 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.03□□□□□ -1.76
TCRAP04437 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TCRAP04437 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
TCRAP04437 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.03□□□□□ -1.76
TCRAP04437 AC005294.1-201ENST00000355509 281 ntBASIC4.03□□□□□ -1.76
TCRAP04437 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TCRAP04437 RNA5SP477-201ENST00000362639 119 ntBASIC4.03□□□□□ -1.76
TCRAP04437 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TCRAP04437 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TCRAP04437 GAPDHP42-201ENST00000406848 981 ntBASIC4.03□□□□□ -1.76
TCRAP04437 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.03□□□□□ -1.76
TCRAP04437 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TCRAP04437 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC4.03□□□□□ -1.76
TCRAP04437 MARK2P12-201ENST00000420129 585 ntBASIC4.03□□□□□ -1.76
TCRAP04437 AC127526.2-201ENST00000426436 775 ntBASIC4.03□□□□□ -1.76
TCRAP04437 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.03□□□□□ -1.76
TCRAP04437 NOP56P2-201ENST00000447491 769 ntBASIC4.03□□□□□ -1.76
TCRAP04437 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.03□□□□□ -1.76
TCRAP04437 CEACAMP11-201ENST00000455211 583 ntBASIC4.03□□□□□ -1.76
TCRAP04437 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC4.03□□□□□ -1.76
TCRAP04437 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC4.03□□□□□ -1.76
TCRAP04437 AC079168.1-201ENST00000458741 345 ntBASIC4.03□□□□□ -1.76
TCRAP04437 RPL5P22-201ENST00000480199 884 ntBASIC4.03□□□□□ -1.76
TCRAP04437 RNU6-615P-201ENST00000516065 106 ntBASIC4.03□□□□□ -1.76
TCRAP04437 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.03□□□□□ -1.76
TCRAP04437 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TCRAP04437 AC079905.1-201ENST00000549280 475 ntBASIC4.03□□□□□ -1.76
TCRAP04437 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC4.03□□□□□ -1.76
TCRAP04437 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.03□□□□□ -1.76
TCRAP04437 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC4.03□□□□□ -1.76
TCRAP04437 AC011840.5-201ENST00000582125 771 ntBASIC4.03□□□□□ -1.76
TCRAP04437 AC015802.2-201ENST00000589690 189 ntBASIC4.03□□□□□ -1.76
TCRAP04437 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TCRAP04437 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms