Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 RN7SKP15-201ENST00000364742 309 ntBASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 MIR1275-201ENST00000408770 80 ntBASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 U3.43-201ENST00000410734 213 ntBASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 AL139158.1-201ENST00000424719 340 ntBASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 USP9YP11-201ENST00000427537 717 ntBASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 OR6K5P-201ENST00000447050 945 ntBASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 RN7SL221P-201ENST00000466190 281 ntBASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 RPL7AP23-201ENST00000482625 776 ntBASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 MTCYBP44-201ENST00000514835 823 ntBASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 AP005902.2-201ENST00000518393 307 ntBASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 AC011853.1-201ENST00000518911 454 ntBASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 AL162632.2-201ENST00000553933 399 ntBASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 AL132640.1-201ENST00000559594 619 ntBASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 AL020997.3-201ENST00000602843 359 ntBASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 uc_338.29-201ENST00000615099 168 ntBASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 STMN1P1-201ENST00000617809 440 ntBASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 AC005858.3-201ENST00000624756 589 ntBASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 MIR1910-201ENST00000636955 80 ntBASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 AC012321.1-201ENST00000561622 1588 ntBASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
CCM2LQ9NUG4 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.09□□□□□ -1.44
CCM2LQ9NUG4 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
CCM2LQ9NUG4 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.09□□□□□ -1.44
CCM2LQ9NUG4 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
CCM2LQ9NUG4 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
CCM2LQ9NUG4 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.44
CCM2LQ9NUG4 MSL3P1-202ENST00000440028 1468 ntBASIC6.09□□□□□ -1.44
CCM2LQ9NUG4 AC217777.1-201ENST00000570034 1471 ntBASIC6.09□□□□□ -1.44
CCM2LQ9NUG4 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.09□□□□□ -1.44
CCM2LQ9NUG4 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
CCM2LQ9NUG4 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCM2LQ9NUG4 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCM2LQ9NUG4 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CCM2LQ9NUG4 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.08□□□□□ -1.44
CCM2LQ9NUG4 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.08□□□□□ -1.44
CCM2LQ9NUG4 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CCM2LQ9NUG4 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CCM2LQ9NUG4 AP000432.2-201ENST00000624164 2048 ntBASIC6.08□□□□□ -1.44
CCM2LQ9NUG4 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.08□□□□□ -1.44
CCM2LQ9NUG4 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCM2LQ9NUG4 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CCM2LQ9NUG4 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.08□□□□□ -1.44
CCM2LQ9NUG4 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCM2LQ9NUG4 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CCM2LQ9NUG4 RNA5SP382-201ENST00000363355 112 ntBASIC6.08□□□□□ -1.44
CCM2LQ9NUG4 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC6.08□□□□□ -1.44
CCM2LQ9NUG4 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CCM2LQ9NUG4 AC104297.1-201ENST00000393779 870 ntBASIC6.08□□□□□ -1.44
CCM2LQ9NUG4 AC026310.1-201ENST00000396004 378 ntBASIC6.08□□□□□ -1.44
CCM2LQ9NUG4 TAF13P2-201ENST00000416876 286 ntBASIC6.08□□□□□ -1.44
CCM2LQ9NUG4 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC6.08□□□□□ -1.44
CCM2LQ9NUG4 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC6.08□□□□□ -1.44
CCM2LQ9NUG4 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.08□□□□□ -1.44
CCM2LQ9NUG4 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC6.08□□□□□ -1.44
CCM2LQ9NUG4 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC6.08□□□□□ -1.44
CCM2LQ9NUG4 AL590128.1-201ENST00000433407 286 ntBASIC6.08□□□□□ -1.44
CCM2LQ9NUG4 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC6.08□□□□□ -1.44
CCM2LQ9NUG4 SETD6P1-201ENST00000444575 317 ntBASIC6.08□□□□□ -1.44
CCM2LQ9NUG4 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.08□□□□□ -1.44
CCM2LQ9NUG4 AC234771.2-201ENST00000445718 597 ntBASIC6.08□□□□□ -1.44
CCM2LQ9NUG4 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC6.08□□□□□ -1.44
CCM2LQ9NUG4 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC6.08□□□□□ -1.44
CCM2LQ9NUG4 RPS26P6-201ENST00000475156 348 ntBASIC6.08□□□□□ -1.44
CCM2LQ9NUG4 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms