Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
TOPBP1Q92547 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC8.72□□□□□ -1.01
TOPBP1Q92547 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
TOPBP1Q92547 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.01
TOPBP1Q92547 AC009948.3-201ENST00000603415 1798 ntBASIC8.71□□□□□ -1.01
TOPBP1Q92547 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC8.71□□□□□ -1.01
TOPBP1Q92547 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC8.71□□□□□ -1.01
TOPBP1Q92547 AL137845.2-201ENST00000444292 988 ntBASIC8.71□□□□□ -1.01
TOPBP1Q92547 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC8.71□□□□□ -1.01
TOPBP1Q92547 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC8.71□□□□□ -1.01
TOPBP1Q92547 AL392048.1-201ENST00000613946 534 ntBASIC8.71□□□□□ -1.01
TOPBP1Q92547 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
TOPBP1Q92547 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.02
TOPBP1Q92547 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC8.71□□□□□ -1.02
TOPBP1Q92547 AC100757.1-201ENST00000616872 1835 ntBASIC8.71□□□□□ -1.02
TOPBP1Q92547 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
TOPBP1Q92547 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.02
TOPBP1Q92547 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
TOPBP1Q92547 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
TOPBP1Q92547 DHX40P1-201ENST00000588725 1412 ntBASIC8.71□□□□□ -1.02
TOPBP1Q92547 AC010928.1-201ENST00000592477 1447 ntBASIC8.71□□□□□ -1.02
TOPBP1Q92547 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC8.71□□□□□ -1.02
TOPBP1Q92547 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC8.71□□□□□ -1.02
TOPBP1Q92547 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC8.71□□□□□ -1.02
TOPBP1Q92547 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
TOPBP1Q92547 RPS29P10-201ENST00000439197 166 ntBASIC8.7□□□□□ -1.02
TOPBP1Q92547 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC8.7□□□□□ -1.02
TOPBP1Q92547 RPL10P17-201ENST00000453852 316 ntBASIC8.7□□□□□ -1.02
TOPBP1Q92547 RPL12P20-201ENST00000475538 479 ntBASIC8.7□□□□□ -1.02
TOPBP1Q92547 RN7SL41P-201ENST00000476144 297 ntBASIC8.7□□□□□ -1.02
TOPBP1Q92547 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC8.7□□□□□ -1.02
TOPBP1Q92547 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC8.7□□□□□ -1.02
TOPBP1Q92547 AL110118.1-201ENST00000553543 400 ntBASIC8.7□□□□□ -1.02
TOPBP1Q92547 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC8.7□□□□□ -1.02
TOPBP1Q92547 AC018558.5-201ENST00000565840 952 ntBASIC8.7□□□□□ -1.02
TOPBP1Q92547 AC098935.2-201ENST00000604222 466 ntBASIC8.7□□□□□ -1.02
TOPBP1Q92547 AC009027.1-201ENST00000604510 479 ntBASIC8.7□□□□□ -1.02
TOPBP1Q92547 AC010857.1-201ENST00000606398 594 ntBASIC8.7□□□□□ -1.02
TOPBP1Q92547 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC8.7□□□□□ -1.02
TOPBP1Q92547 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC8.7□□□□□ -1.02
TOPBP1Q92547 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
TOPBP1Q92547 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC8.7□□□□□ -1.02
TOPBP1Q92547 ZNF969P-201ENST00000510345 2341 ntBASIC8.7□□□□□ -1.02
TOPBP1Q92547 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
TOPBP1Q92547 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC8.7□□□□□ -1.02
TOPBP1Q92547 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
TOPBP1Q92547 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC8.7□□□□□ -1.02
TOPBP1Q92547 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC8.7□□□□□ -1.02
TOPBP1Q92547 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC8.7□□□□□ -1.02
TOPBP1Q92547 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC8.7□□□□□ -1.02
TOPBP1Q92547 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
TOPBP1Q92547 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
TOPBP1Q92547 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
TOPBP1Q92547 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC8.7□□□□□ -1.02
TOPBP1Q92547 AC234779.1-201ENST00000425910 285 ntBASIC8.7□□□□□ -1.02
TOPBP1Q92547 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC8.7□□□□□ -1.02
TOPBP1Q92547 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC8.7□□□□□ -1.02
TOPBP1Q92547 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC8.7□□□□□ -1.02
TOPBP1Q92547 MIR1254-2-201ENST00000579553 63 ntBASIC8.7□□□□□ -1.02
TOPBP1Q92547 AC008655.2-201ENST00000597049 304 ntTSL 4 BASIC8.7□□□□□ -1.02
TOPBP1Q92547 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC8.7□□□□□ -1.02
TOPBP1Q92547 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC8.7□□□□□ -1.02
TOPBP1Q92547 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
TOPBP1Q92547 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
TOPBP1Q92547 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
TOPBP1Q92547 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
TOPBP1Q92547 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
TOPBP1Q92547 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
TOPBP1Q92547 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC8.69□□□□□ -1.02
TOPBP1Q92547 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
TOPBP1Q92547 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC8.69□□□□□ -1.02
TOPBP1Q92547 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC8.69□□□□□ -1.02
TOPBP1Q92547 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
TOPBP1Q92547 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
TOPBP1Q92547 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
TOPBP1Q92547 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC8.69□□□□□ -1.02
TOPBP1Q92547 TRIM60P9Y-201ENST00000438459 816 ntBASIC8.69□□□□□ -1.02
TOPBP1Q92547 KRT8P51-201ENST00000438938 274 ntBASIC8.69□□□□□ -1.02
TOPBP1Q92547 AL390879.1-201ENST00000439143 386 ntBASIC8.69□□□□□ -1.02
TOPBP1Q92547 TXNP5-201ENST00000441043 315 ntBASIC8.69□□□□□ -1.02
TOPBP1Q92547 TRIM60P11Y-201ENST00000445313 801 ntBASIC8.69□□□□□ -1.02
TOPBP1Q92547 EIF2S2P2-201ENST00000447161 982 ntBASIC8.69□□□□□ -1.02
TOPBP1Q92547 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC8.69□□□□□ -1.02
TOPBP1Q92547 snoU13.1-201ENST00000459157 104 ntBASIC8.69□□□□□ -1.02
TOPBP1Q92547 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
TOPBP1Q92547 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC8.69□□□□□ -1.02
TOPBP1Q92547 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC8.69□□□□□ -1.02
TOPBP1Q92547 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC8.69□□□□□ -1.02
TOPBP1Q92547 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC8.69□□□□□ -1.02
TOPBP1Q92547 AL109618.2-201ENST00000605527 211 ntBASIC8.69□□□□□ -1.02
TOPBP1Q92547 AC006338.2-201ENST00000616864 791 ntBASIC8.69□□□□□ -1.02
TOPBP1Q92547 NEK3-211ENST00000629912 141 ntTSL 5 BASIC8.69□□□□□ -1.02
TOPBP1Q92547 AC099654.6-201ENST00000636487 512 ntBASIC8.69□□□□□ -1.02
TOPBP1Q92547 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
TOPBP1Q92547 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
TOPBP1Q92547 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC8.68□□□□□ -1.02
TOPBP1Q92547 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
TOPBP1Q92547 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC8.68□□□□□ -1.02
TOPBP1Q92547 SAMMSON-226ENST00000642089 1582 ntBASIC8.68□□□□□ -1.02
TOPBP1Q92547 AL359715.3-201ENST00000569267 2123 ntBASIC8.68□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms