Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HMGB4Q8WW32 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
HMGB4Q8WW32 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.89□□□□□ -1.47
HMGB4Q8WW32 AL731532.1-201ENST00000623972 4236 ntBASIC5.89□□□□□ -1.47
HMGB4Q8WW32 AL591135.1-201ENST00000401578 5914 ntBASIC5.89□□□□□ -1.47
HMGB4Q8WW32 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
HMGB4Q8WW32 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HMGB4Q8WW32 MTCO1P4-201ENST00000520516 1409 ntBASIC5.89□□□□□ -1.47
HMGB4Q8WW32 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HMGB4Q8WW32 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HMGB4Q8WW32 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
HMGB4Q8WW32 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
HMGB4Q8WW32 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HMGB4Q8WW32 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.88□□□□□ -1.47
HMGB4Q8WW32 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
HMGB4Q8WW32 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HMGB4Q8WW32 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.88□□□□□ -1.47
HMGB4Q8WW32 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HMGB4Q8WW32 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HMGB4Q8WW32 AL669831.5-218ENST00000591702 1873 ntBASIC5.88□□□□□ -1.47
HMGB4Q8WW32 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
HMGB4Q8WW32 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
HMGB4Q8WW32 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
HMGB4Q8WW32 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HMGB4Q8WW32 SNORA74A-201ENST00000364089 198 ntBASIC5.88□□□□□ -1.47
HMGB4Q8WW32 RNA5SP211-201ENST00000365516 117 ntBASIC5.88□□□□□ -1.47
HMGB4Q8WW32 AL672167.2-201ENST00000377164 879 ntBASIC5.88□□□□□ -1.47
HMGB4Q8WW32 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.88□□□□□ -1.47
HMGB4Q8WW32 RNU6-925P-201ENST00000384629 104 ntBASIC5.88□□□□□ -1.47
HMGB4Q8WW32 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
HMGB4Q8WW32 OR2W4P-201ENST00000406496 926 ntBASIC5.88□□□□□ -1.47
HMGB4Q8WW32 RNU4-64P-201ENST00000410795 131 ntBASIC5.88□□□□□ -1.47
HMGB4Q8WW32 RN7SKP166-201ENST00000410812 305 ntBASIC5.88□□□□□ -1.47
HMGB4Q8WW32 RPS21P8-201ENST00000413365 247 ntBASIC5.88□□□□□ -1.47
HMGB4Q8WW32 NENFP1-201ENST00000419476 466 ntBASIC5.88□□□□□ -1.47
HMGB4Q8WW32 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC5.88□□□□□ -1.47
HMGB4Q8WW32 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.88□□□□□ -1.47
HMGB4Q8WW32 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC5.88□□□□□ -1.47
HMGB4Q8WW32 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.88□□□□□ -1.47
HMGB4Q8WW32 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.88□□□□□ -1.47
HMGB4Q8WW32 CFL1P1-202ENST00000432948 411 ntBASIC5.88□□□□□ -1.47
HMGB4Q8WW32 PTP4A1P3-201ENST00000433661 420 ntBASIC5.88□□□□□ -1.47
HMGB4Q8WW32 AL627308.1-201ENST00000435693 821 ntBASIC5.88□□□□□ -1.47
HMGB4Q8WW32 AC012075.1-201ENST00000436549 580 ntBASIC5.88□□□□□ -1.47
HMGB4Q8WW32 AC005297.1-201ENST00000444765 862 ntBASIC5.88□□□□□ -1.47
HMGB4Q8WW32 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.88□□□□□ -1.47
HMGB4Q8WW32 ATP5G1P3-201ENST00000463301 410 ntBASIC5.88□□□□□ -1.47
HMGB4Q8WW32 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.88□□□□□ -1.47
HMGB4Q8WW32 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HMGB4Q8WW32 AC021146.7-201ENST00000509604 775 ntBASIC5.88□□□□□ -1.47
HMGB4Q8WW32 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.88□□□□□ -1.47
HMGB4Q8WW32 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
HMGB4Q8WW32 OR4A17P-201ENST00000526032 904 ntBASIC5.88□□□□□ -1.47
HMGB4Q8WW32 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.88□□□□□ -1.47
HMGB4Q8WW32 KCTD9P4-201ENST00000526766 1166 ntBASIC5.88□□□□□ -1.47
HMGB4Q8WW32 AC004923.2-201ENST00000529649 369 ntBASIC5.88□□□□□ -1.47
HMGB4Q8WW32 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC5.88□□□□□ -1.47
HMGB4Q8WW32 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC5.88□□□□□ -1.47
HMGB4Q8WW32 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.88□□□□□ -1.47
HMGB4Q8WW32 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.88□□□□□ -1.47
HMGB4Q8WW32 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.88□□□□□ -1.47
HMGB4Q8WW32 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HMGB4Q8WW32 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.88□□□□□ -1.47
HMGB4Q8WW32 MTCO2P22-201ENST00000603246 681 ntBASIC5.88□□□□□ -1.47
HMGB4Q8WW32 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.88□□□□□ -1.47
HMGB4Q8WW32 AC090617.9-201ENST00000623751 147 ntBASIC5.88□□□□□ -1.47
HMGB4Q8WW32 AL390318.1-201ENST00000624564 687 ntBASIC5.88□□□□□ -1.47
HMGB4Q8WW32 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HMGB4Q8WW32 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
HMGB4Q8WW32 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.88□□□□□ -1.47
HMGB4Q8WW32 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
HMGB4Q8WW32 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HMGB4Q8WW32 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HMGB4Q8WW32 SRRM1P3-201ENST00000426911 2678 ntBASIC5.88□□□□□ -1.47
HMGB4Q8WW32 YES1P1-201ENST00000418510 1628 ntBASIC5.88□□□□□ -1.47
HMGB4Q8WW32 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
HMGB4Q8WW32 MTND5P23-201ENST00000430812 1655 ntBASIC5.88□□□□□ -1.47
HMGB4Q8WW32 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
HMGB4Q8WW32 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC5.88□□□□□ -1.47
HMGB4Q8WW32 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
HMGB4Q8WW32 MRE11P1-201ENST00000464884 2127 ntBASIC5.87□□□□□ -1.47
HMGB4Q8WW32 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
HMGB4Q8WW32 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.87□□□□□ -1.47
HMGB4Q8WW32 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HMGB4Q8WW32 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
HMGB4Q8WW32 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HMGB4Q8WW32 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HMGB4Q8WW32 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HMGB4Q8WW32 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HMGB4Q8WW32 AP000534.2-201ENST00000412729 568 ntBASIC5.87□□□□□ -1.47
HMGB4Q8WW32 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.87□□□□□ -1.47
HMGB4Q8WW32 MRPL50P1-201ENST00000431951 384 ntBASIC5.87□□□□□ -1.47
HMGB4Q8WW32 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.87□□□□□ -1.47
HMGB4Q8WW32 AL663074.2-201ENST00000440621 479 ntBASIC5.87□□□□□ -1.47
HMGB4Q8WW32 HMGN1P5-201ENST00000448591 263 ntBASIC5.87□□□□□ -1.47
HMGB4Q8WW32 RPS17P15-201ENST00000475609 349 ntBASIC5.87□□□□□ -1.47
HMGB4Q8WW32 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HMGB4Q8WW32 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.87□□□□□ -1.47
HMGB4Q8WW32 SUMO1P1-201ENST00000497904 306 ntBASIC5.87□□□□□ -1.47
HMGB4Q8WW32 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 142.2 ms