Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 AC006927.3-201ENST00000638789 384 ntBASIC5.77□□□□□ -1.49
BHLHA9Q7RTU4 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
BHLHA9Q7RTU4 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
BHLHA9Q7RTU4 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
BHLHA9Q7RTU4 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
BHLHA9Q7RTU4 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
BHLHA9Q7RTU4 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
BHLHA9Q7RTU4 ZNF658B-201ENST00000602828 3408 ntBASIC5.77□□□□□ -1.49
BHLHA9Q7RTU4 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.77□□□□□ -1.49
BHLHA9Q7RTU4 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 AC104964.3-201ENST00000606115 2860 ntBASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 MTCO1P11-201ENST00000429111 1528 ntBASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 RNA5SP183-201ENST00000362452 119 ntBASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 RN7SKP162-201ENST00000363605 345 ntBASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 RNU6-650P-201ENST00000365658 111 ntBASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 RNU4-2-201ENST00000365668 141 ntBASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 MIR551A-201ENST00000385042 96 ntBASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 PRUNEP1-201ENST00000425846 705 ntBASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 MUPP-201ENST00000438111 566 ntBASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 AC069540.1-201ENST00000446320 988 ntBASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 RPS26P41-201ENST00000450370 284 ntBASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 MTND2P6-201ENST00000455337 1030 ntBASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 AC108693.1-201ENST00000496068 432 ntBASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 AC010627.1-201ENST00000503819 1294 ntBASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 AC020699.1-201ENST00000505161 445 ntBASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 AC078878.1-201ENST00000539832 958 ntBASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 MTND1P24-201ENST00000552175 861 ntBASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 MIR4489-201ENST00000578869 62 ntBASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 AC135507.1-201ENST00000607214 561 ntBASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 AL096803.3-201ENST00000609032 532 ntBASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 AC090912.3-201ENST00000609775 533 ntBASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 AC109309.2-201ENST00000612597 332 ntBASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 CASC19-248ENST00000641674 1356 ntBASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 AL355834.1-201ENST00000556602 3965 ntBASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
BHLHA9Q7RTU4 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
BHLHA9Q7RTU4 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.75□□□□□ -1.49
BHLHA9Q7RTU4 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
BHLHA9Q7RTU4 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
BHLHA9Q7RTU4 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.75□□□□□ -1.49
BHLHA9Q7RTU4 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
BHLHA9Q7RTU4 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
BHLHA9Q7RTU4 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
BHLHA9Q7RTU4 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
BHLHA9Q7RTU4 MIR133B-201ENST00000362210 119 ntBASIC5.75□□□□□ -1.49
BHLHA9Q7RTU4 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
BHLHA9Q7RTU4 RSL24D1P1-201ENST00000404972 493 ntBASIC5.75□□□□□ -1.49
BHLHA9Q7RTU4 MTND3P20-201ENST00000407663 186 ntBASIC5.75□□□□□ -1.49
BHLHA9Q7RTU4 RN7SKP229-201ENST00000410465 302 ntBASIC5.75□□□□□ -1.49
BHLHA9Q7RTU4 PCNPP4-201ENST00000414817 517 ntBASIC5.75□□□□□ -1.49
BHLHA9Q7RTU4 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC5.75□□□□□ -1.49
BHLHA9Q7RTU4 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC5.75□□□□□ -1.49
BHLHA9Q7RTU4 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
BHLHA9Q7RTU4 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.75□□□□□ -1.49
BHLHA9Q7RTU4 RIMKLBP2-201ENST00000424737 654 ntBASIC5.75□□□□□ -1.49
BHLHA9Q7RTU4 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.75□□□□□ -1.49
BHLHA9Q7RTU4 MTCO3P30-201ENST00000426425 670 ntBASIC5.75□□□□□ -1.49
BHLHA9Q7RTU4 AC073072.2-201ENST00000447425 348 ntBASIC5.75□□□□□ -1.49
BHLHA9Q7RTU4 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.75□□□□□ -1.49
BHLHA9Q7RTU4 USP9YP10-201ENST00000454868 628 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms