Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC140479.2-201ENST00000421567 3130 ntBASIC5.56□□□□□ -1.52
RAE1P78406 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RAE1P78406 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
RAE1P78406 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RAE1P78406 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.56□□□□□ -1.52
RAE1P78406 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
RAE1P78406 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.56□□□□□ -1.52
RAE1P78406 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
RAE1P78406 RNU6-298P-201ENST00000390888 96 ntBASIC5.56□□□□□ -1.52
RAE1P78406 RNA5SP91-201ENST00000390902 119 ntBASIC5.56□□□□□ -1.52
RAE1P78406 SNORA79B-201ENST00000410557 148 ntBASIC5.56□□□□□ -1.52
RAE1P78406 RN7SKP279-201ENST00000411383 298 ntBASIC5.56□□□□□ -1.52
RAE1P78406 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.56□□□□□ -1.52
RAE1P78406 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC5.56□□□□□ -1.52
RAE1P78406 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.56□□□□□ -1.52
RAE1P78406 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.56□□□□□ -1.52
RAE1P78406 FABP5P3-201ENST00000437960 408 ntBASIC5.56□□□□□ -1.52
RAE1P78406 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.56□□□□□ -1.52
RAE1P78406 AC023141.8-201ENST00000442554 208 ntBASIC5.56□□□□□ -1.52
RAE1P78406 DNAJC19P5-201ENST00000443295 316 ntBASIC5.56□□□□□ -1.52
RAE1P78406 AL353898.1-201ENST00000444055 238 ntBASIC5.56□□□□□ -1.52
RAE1P78406 RPS27P5-201ENST00000444247 244 ntBASIC5.56□□□□□ -1.52
RAE1P78406 AL009048.1-201ENST00000450437 298 ntBASIC5.56□□□□□ -1.52
RAE1P78406 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.56□□□□□ -1.52
RAE1P78406 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.56□□□□□ -1.52
RAE1P78406 CST12P-201ENST00000457644 362 ntBASIC5.56□□□□□ -1.52
RAE1P78406 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC5.56□□□□□ -1.52
RAE1P78406 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.56□□□□□ -1.52
RAE1P78406 AC098847.1-201ENST00000473094 348 ntBASIC5.56□□□□□ -1.52
RAE1P78406 LARP7P4-201ENST00000481075 878 ntBASIC5.56□□□□□ -1.52
RAE1P78406 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RAE1P78406 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC5.56□□□□□ -1.52
RAE1P78406 AC093720.1-201ENST00000505681 714 ntBASIC5.56□□□□□ -1.52
RAE1P78406 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC5.56□□□□□ -1.52
RAE1P78406 AC133963.2-201ENST00000513686 578 ntBASIC5.56□□□□□ -1.52
RAE1P78406 RN7SKP183-201ENST00000517169 324 ntBASIC5.56□□□□□ -1.52
RAE1P78406 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.56□□□□□ -1.52
RAE1P78406 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.56□□□□□ -1.52
RAE1P78406 OR8G5-201ENST00000524943 1041 ntBASIC5.56□□□□□ -1.52
RAE1P78406 AC084121.1-201ENST00000533882 835 ntBASIC5.56□□□□□ -1.52
RAE1P78406 OR8K4P-201ENST00000534608 872 ntBASIC5.56□□□□□ -1.52
RAE1P78406 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC5.56□□□□□ -1.52
RAE1P78406 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC5.56□□□□□ -1.52
RAE1P78406 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.56□□□□□ -1.52
RAE1P78406 RPA2P1-201ENST00000556557 721 ntBASIC5.56□□□□□ -1.52
RAE1P78406 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.56□□□□□ -1.52
RAE1P78406 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
RAE1P78406 AC010735.1-201ENST00000567305 1026 ntBASIC5.56□□□□□ -1.52
RAE1P78406 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.56□□□□□ -1.52
RAE1P78406 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.56□□□□□ -1.52
RAE1P78406 MIR3154-201ENST00000577829 84 ntBASIC5.56□□□□□ -1.52
RAE1P78406 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.56□□□□□ -1.52
RAE1P78406 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.56□□□□□ -1.52
RAE1P78406 AL136131.3-201ENST00000607600 188 ntBASIC5.56□□□□□ -1.52
RAE1P78406 AP001437.1-201ENST00000608783 456 ntBASIC5.56□□□□□ -1.52
RAE1P78406 AL359091.2-201ENST00000609303 556 ntBASIC5.56□□□□□ -1.52
RAE1P78406 AP000484.1-201ENST00000620067 1252 ntBASIC5.56□□□□□ -1.52
RAE1P78406 AL683826.1-201ENST00000624104 627 ntBASIC5.56□□□□□ -1.52
RAE1P78406 AC083865.1-201ENST00000636634 831 ntBASIC5.56□□□□□ -1.52
RAE1P78406 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
RAE1P78406 CASC19-274ENST00000642018 970 ntBASIC5.56□□□□□ -1.52
RAE1P78406 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RAE1P78406 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.56□□□□□ -1.52
RAE1P78406 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RAE1P78406 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RAE1P78406 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.56□□□□□ -1.52
RAE1P78406 MSL3P1-202ENST00000440028 1468 ntBASIC5.56□□□□□ -1.52
RAE1P78406 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RAE1P78406 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RAE1P78406 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RAE1P78406 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RAE1P78406 AC092111.2-201ENST00000611627 1414 ntBASIC5.56□□□□□ -1.52
RAE1P78406 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RAE1P78406 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.56□□□□□ -1.52
RAE1P78406 AL669831.5-218ENST00000591702 1873 ntBASIC5.56□□□□□ -1.52
RAE1P78406 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.56□□□□□ -1.52
RAE1P78406 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
RAE1P78406 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.56□□□□□ -1.52
RAE1P78406 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.55□□□□□ -1.52
RAE1P78406 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
RAE1P78406 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
RAE1P78406 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RAE1P78406 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
RAE1P78406 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.55□□□□□ -1.52
RAE1P78406 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RAE1P78406 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
RAE1P78406 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.55□□□□□ -1.52
RAE1P78406 RNU5B-4P-201ENST00000363508 111 ntBASIC5.55□□□□□ -1.52
RAE1P78406 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.55□□□□□ -1.52
RAE1P78406 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RAE1P78406 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
RAE1P78406 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
RAE1P78406 AP002784.2-201ENST00000397300 549 ntBASIC5.55□□□□□ -1.52
RAE1P78406 AC016739.1-201ENST00000405359 345 ntBASIC5.55□□□□□ -1.52
RAE1P78406 RNA5SP431-201ENST00000410312 120 ntBASIC5.55□□□□□ -1.52
RAE1P78406 RPS21P8-201ENST00000413365 247 ntBASIC5.55□□□□□ -1.52
RAE1P78406 SSR1P2-201ENST00000415208 787 ntBASIC5.55□□□□□ -1.52
RAE1P78406 METTL15P3-201ENST00000415522 1221 ntBASIC5.55□□□□□ -1.52
RAE1P78406 AC242426.1-201ENST00000435270 960 ntBASIC5.55□□□□□ -1.52
RAE1P78406 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms