Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.99□□□□□ -1.45
TPM4P67936 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.99□□□□□ -1.45
TPM4P67936 LSM3P4-201ENST00000502948 309 ntBASIC5.99□□□□□ -1.45
TPM4P67936 AC018797.1-201ENST00000510791 255 ntBASIC5.99□□□□□ -1.45
TPM4P67936 MRPS5P3-201ENST00000515577 166 ntBASIC5.99□□□□□ -1.45
TPM4P67936 RNU6-964P-201ENST00000516524 69 ntBASIC5.99□□□□□ -1.45
TPM4P67936 SNORA70.20-201ENST00000516848 126 ntBASIC5.99□□□□□ -1.45
TPM4P67936 AP003033.2-201ENST00000528901 805 ntBASIC5.99□□□□□ -1.45
TPM4P67936 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.99□□□□□ -1.45
TPM4P67936 IGBP1P1-201ENST00000554337 1009 ntBASIC5.99□□□□□ -1.45
TPM4P67936 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.99□□□□□ -1.45
TPM4P67936 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.99□□□□□ -1.45
TPM4P67936 AC022884.2-201ENST00000578535 580 ntBASIC5.99□□□□□ -1.45
TPM4P67936 RN7SL356P-201ENST00000582228 248 ntBASIC5.99□□□□□ -1.45
TPM4P67936 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.99□□□□□ -1.45
TPM4P67936 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.99□□□□□ -1.45
TPM4P67936 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.99□□□□□ -1.45
TPM4P67936 RN7SL544P-201ENST00000617232 284 ntBASIC5.99□□□□□ -1.45
TPM4P67936 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.99□□□□□ -1.45
TPM4P67936 RN7SL763P-201ENST00000620922 284 ntBASIC5.99□□□□□ -1.45
TPM4P67936 AC111152.1-202ENST00000635848 339 ntBASIC5.99□□□□□ -1.45
TPM4P67936 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TPM4P67936 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TPM4P67936 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TPM4P67936 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
TPM4P67936 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TPM4P67936 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TPM4P67936 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.98□□□□□ -1.45
TPM4P67936 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.98□□□□□ -1.45
TPM4P67936 XKRY2-202ENST00000623874 1581 ntBASIC5.98□□□□□ -1.45
TPM4P67936 XKRY-202ENST00000624960 1581 ntBASIC5.98□□□□□ -1.45
TPM4P67936 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TPM4P67936 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
TPM4P67936 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.98□□□□□ -1.45
TPM4P67936 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
TPM4P67936 OR7E101P-201ENST00000400428 513 ntBASIC5.98□□□□□ -1.45
TPM4P67936 DBIP1-201ENST00000401435 260 ntBASIC5.98□□□□□ -1.45
TPM4P67936 GAPDHP58-201ENST00000438477 1006 ntBASIC5.98□□□□□ -1.45
TPM4P67936 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.98□□□□□ -1.45
TPM4P67936 GTF3AP5-201ENST00000442645 697 ntBASIC5.98□□□□□ -1.45
TPM4P67936 AC021006.1-201ENST00000489849 553 ntBASIC5.98□□□□□ -1.45
TPM4P67936 Y_RNA.667-201ENST00000516212 107 ntBASIC5.98□□□□□ -1.45
TPM4P67936 RNA5SP438-201ENST00000516561 112 ntBASIC5.98□□□□□ -1.45
TPM4P67936 MRPS16P1-201ENST00000523462 412 ntBASIC5.98□□□□□ -1.45
TPM4P67936 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.98□□□□□ -1.45
TPM4P67936 CYCSP38-201ENST00000559840 322 ntBASIC5.98□□□□□ -1.45
TPM4P67936 AL390726.5-202ENST00000564800 256 ntBASIC5.98□□□□□ -1.45
TPM4P67936 MIR3154-201ENST00000577829 84 ntBASIC5.98□□□□□ -1.45
TPM4P67936 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.98□□□□□ -1.45
TPM4P67936 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.98□□□□□ -1.45
TPM4P67936 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.98□□□□□ -1.45
TPM4P67936 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
TPM4P67936 AC129778.1-202ENST00000623812 261 ntBASIC5.98□□□□□ -1.45
TPM4P67936 AL591379.1-207ENST00000635982 261 ntBASIC5.98□□□□□ -1.45
TPM4P67936 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.98□□□□□ -1.45
TPM4P67936 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
TPM4P67936 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TPM4P67936 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TPM4P67936 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
TPM4P67936 LYARP1-201ENST00000436977 1501 ntBASIC5.98□□□□□ -1.45
TPM4P67936 AC114947.2-201ENST00000565748 2125 ntBASIC5.98□□□□□ -1.45
TPM4P67936 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TPM4P67936 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TPM4P67936 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
TPM4P67936 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
TPM4P67936 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
TPM4P67936 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
TPM4P67936 NEPNP-201ENST00000404786 1371 ntBASIC5.97□□□□□ -1.45
TPM4P67936 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TPM4P67936 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TPM4P67936 TMSB4XP2-201ENST00000335179 210 ntBASIC5.97□□□□□ -1.45
TPM4P67936 RNA5SP223-201ENST00000365174 120 ntBASIC5.97□□□□□ -1.45
TPM4P67936 RNA5SP131-201ENST00000365452 119 ntBASIC5.97□□□□□ -1.45
TPM4P67936 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TPM4P67936 MIR1203-201ENST00000408812 85 ntBASIC5.97□□□□□ -1.45
TPM4P67936 RN7SKP286-201ENST00000410894 299 ntBASIC5.97□□□□□ -1.45
TPM4P67936 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC5.97□□□□□ -1.45
TPM4P67936 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TPM4P67936 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.97□□□□□ -1.45
TPM4P67936 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.97□□□□□ -1.45
TPM4P67936 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
TPM4P67936 MRE11P1-201ENST00000464884 2127 ntBASIC5.97□□□□□ -1.45
TPM4P67936 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.97□□□□□ -1.45
TPM4P67936 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.97□□□□□ -1.45
TPM4P67936 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.97□□□□□ -1.45
TPM4P67936 RNU6-1334P-201ENST00000516032 105 ntBASIC5.97□□□□□ -1.45
TPM4P67936 SCARNA16.4-201ENST00000516956 187 ntBASIC5.97□□□□□ -1.45
TPM4P67936 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.97□□□□□ -1.45
TPM4P67936 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.97□□□□□ -1.45
TPM4P67936 AC079905.1-201ENST00000549280 475 ntBASIC5.97□□□□□ -1.45
TPM4P67936 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.97□□□□□ -1.45
TPM4P67936 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.97□□□□□ -1.45
TPM4P67936 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.97□□□□□ -1.45
TPM4P67936 AP000648.2-201ENST00000624182 404 ntBASIC5.97□□□□□ -1.45
TPM4P67936 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.97□□□□□ -1.45
TPM4P67936 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TPM4P67936 AC023421.1-201ENST00000590535 1785 ntBASIC5.97□□□□□ -1.45
TPM4P67936 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.97□□□□□ -1.45
TPM4P67936 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.97□□□□□ -1.45
TPM4P67936 IFIT1P1-201ENST00000400497 1449 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms