Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC4.74□□□□□ -1.65
NKX2-1P43699 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.74□□□□□ -1.65
NKX2-1P43699 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC4.74□□□□□ -1.65
NKX2-1P43699 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.74□□□□□ -1.65
NKX2-1P43699 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NKX2-1P43699 AC135983.3-201ENST00000528049 1226 ntBASIC4.74□□□□□ -1.65
NKX2-1P43699 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC4.74□□□□□ -1.65
NKX2-1P43699 AC023158.1-201ENST00000561632 1025 ntBASIC4.74□□□□□ -1.65
NKX2-1P43699 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC4.74□□□□□ -1.65
NKX2-1P43699 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC4.74□□□□□ -1.65
NKX2-1P43699 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.74□□□□□ -1.65
NKX2-1P43699 AC025283.1-201ENST00000572039 734 ntBASIC4.74□□□□□ -1.65
NKX2-1P43699 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC4.74□□□□□ -1.65
NKX2-1P43699 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC4.74□□□□□ -1.65
NKX2-1P43699 AL645933.2-201ENST00000606743 1207 ntBASIC4.74□□□□□ -1.65
NKX2-1P43699 AC110792.4-201ENST00000609843 298 ntBASIC4.74□□□□□ -1.65
NKX2-1P43699 AL162574.1-201ENST00000615702 950 ntBASIC4.74□□□□□ -1.65
NKX2-1P43699 AC211486.4-201ENST00000621495 113 ntBASIC4.74□□□□□ -1.65
NKX2-1P43699 AL359742.1-201ENST00000622497 540 ntBASIC4.74□□□□□ -1.65
NKX2-1P43699 AP006248.3-201ENST00000623580 594 ntBASIC4.74□□□□□ -1.65
NKX2-1P43699 AC090617.9-201ENST00000623751 147 ntBASIC4.74□□□□□ -1.65
NKX2-1P43699 AC022919.1-201ENST00000624979 626 ntBASIC4.74□□□□□ -1.65
NKX2-1P43699 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
NKX2-1P43699 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC4.74□□□□□ -1.65
NKX2-1P43699 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
NKX2-1P43699 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NKX2-1P43699 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NKX2-1P43699 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NKX2-1P43699 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
NKX2-1P43699 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NKX2-1P43699 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
NKX2-1P43699 MAPK10-328ENST00000641553 4009 ntBASIC4.74□□□□□ -1.65
NKX2-1P43699 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NKX2-1P43699 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NKX2-1P43699 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
NKX2-1P43699 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
NKX2-1P43699 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
NKX2-1P43699 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NKX2-1P43699 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NKX2-1P43699 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.73□□□□□ -1.65
NKX2-1P43699 AL592494.2-201ENST00000425455 1548 ntBASIC4.73□□□□□ -1.65
NKX2-1P43699 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NKX2-1P43699 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NKX2-1P43699 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NKX2-1P43699 RNFT1P3-201ENST00000340898 1052 ntBASIC4.73□□□□□ -1.65
NKX2-1P43699 RNA5SP85-201ENST00000365378 119 ntBASIC4.73□□□□□ -1.65
NKX2-1P43699 MIR551B-201ENST00000384984 96 ntBASIC4.73□□□□□ -1.65
NKX2-1P43699 AL035405.1-201ENST00000400795 710 ntBASIC4.73□□□□□ -1.65
NKX2-1P43699 UQCRFS1P3-201ENST00000407697 385 ntBASIC4.73□□□□□ -1.65
NKX2-1P43699 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC4.73□□□□□ -1.65
NKX2-1P43699 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC4.73□□□□□ -1.65
NKX2-1P43699 AL590806.1-201ENST00000415818 853 ntBASIC4.73□□□□□ -1.65
NKX2-1P43699 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC4.73□□□□□ -1.65
NKX2-1P43699 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NKX2-1P43699 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC4.73□□□□□ -1.65
NKX2-1P43699 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
NKX2-1P43699 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.73□□□□□ -1.65
NKX2-1P43699 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.73□□□□□ -1.65
NKX2-1P43699 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC4.73□□□□□ -1.65
NKX2-1P43699 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC4.73□□□□□ -1.65
NKX2-1P43699 AC099670.1-201ENST00000455141 783 ntBASIC4.73□□□□□ -1.65
NKX2-1P43699 SNORD125-201ENST00000459538 96 ntBASIC4.73□□□□□ -1.65
NKX2-1P43699 SYT14P1-201ENST00000481459 721 ntBASIC4.73□□□□□ -1.65
NKX2-1P43699 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.73□□□□□ -1.65
NKX2-1P43699 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NKX2-1P43699 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NKX2-1P43699 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NKX2-1P43699 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.73□□□□□ -1.65
NKX2-1P43699 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC4.73□□□□□ -1.65
NKX2-1P43699 AC016550.1-201ENST00000505348 785 ntBASIC4.73□□□□□ -1.65
NKX2-1P43699 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.73□□□□□ -1.65
NKX2-1P43699 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.73□□□□□ -1.65
NKX2-1P43699 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC4.73□□□□□ -1.65
NKX2-1P43699 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.73□□□□□ -1.65
NKX2-1P43699 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.73□□□□□ -1.65
NKX2-1P43699 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC4.73□□□□□ -1.65
NKX2-1P43699 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.73□□□□□ -1.65
NKX2-1P43699 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC4.73□□□□□ -1.65
NKX2-1P43699 TDGP1-201ENST00000543961 1229 ntBASIC4.73□□□□□ -1.65
NKX2-1P43699 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.73□□□□□ -1.65
NKX2-1P43699 AL358913.1-201ENST00000554342 121 ntBASIC4.73□□□□□ -1.65
NKX2-1P43699 AL049870.4-201ENST00000555741 486 ntBASIC4.73□□□□□ -1.65
NKX2-1P43699 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC4.73□□□□□ -1.65
NKX2-1P43699 HMGN1P26-201ENST00000558737 303 ntBASIC4.73□□□□□ -1.65
NKX2-1P43699 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC4.73□□□□□ -1.65
NKX2-1P43699 AC079148.1-201ENST00000565944 819 ntBASIC4.73□□□□□ -1.65
NKX2-1P43699 CBX3P2-202ENST00000583365 535 ntBASIC4.73□□□□□ -1.65
NKX2-1P43699 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC4.73□□□□□ -1.65
NKX2-1P43699 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC4.73□□□□□ -1.65
NKX2-1P43699 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC4.73□□□□□ -1.65
NKX2-1P43699 ZNF92P2-201ENST00000600543 1059 ntBASIC4.73□□□□□ -1.65
NKX2-1P43699 BNIP3P39-201ENST00000601077 554 ntBASIC4.73□□□□□ -1.65
NKX2-1P43699 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC4.73□□□□□ -1.65
NKX2-1P43699 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.73□□□□□ -1.65
NKX2-1P43699 AP001033.2-201ENST00000609701 1003 ntBASIC4.73□□□□□ -1.65
NKX2-1P43699 AC097460.3-201ENST00000623099 442 ntBASIC4.73□□□□□ -1.65
NKX2-1P43699 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC4.73□□□□□ -1.65
NKX2-1P43699 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC4.73□□□□□ -1.65
NKX2-1P43699 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC4.73□□□□□ -1.65
NKX2-1P43699 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms