Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 MIR298-201ENST00000401212 88 ntBASIC5.61□□□□□ -1.51
HTTP42858 Z95327.1-201ENST00000446082 482 ntBASIC5.61□□□□□ -1.51
HTTP42858 MIR3158-1-201ENST00000583596 81 ntBASIC5.61□□□□□ -1.51
HTTP42858 AL591034.3-201ENST00000605511 685 ntBASIC5.61□□□□□ -1.51
HTTP42858 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.61□□□□□ -1.51
HTTP42858 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HTTP42858 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
HTTP42858 USP6-205ENST00000574788 8464 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HTTP42858 AC016745.2-201ENST00000608834 3443 ntBASIC5.61□□□□□ -1.51
HTTP42858 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HTTP42858 CYP1D1P-201ENST00000416662 1433 ntBASIC5.61□□□□□ -1.51
HTTP42858 TNC-210ENST00000535648 7508 ntTSL 5 BASIC5.61□□□□□ -1.51
HTTP42858 DSP-201ENST00000379802 9796 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
HTTP42858 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.61□□□□□ -1.51
HTTP42858 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
HTTP42858 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.61□□□□□ -1.51
HTTP42858 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.61□□□□□ -1.51
HTTP42858 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.61□□□□□ -1.51
HTTP42858 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.61□□□□□ -1.51
HTTP42858 MIAT-218ENST00000613780 10143 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HTTP42858 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
HTTP42858 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HTTP42858 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.6□□□□□ -1.51
HTTP42858 RPL7P19-201ENST00000469948 618 ntBASIC5.6□□□□□ -1.51
HTTP42858 AC093840.1-201ENST00000511599 336 ntBASIC5.6□□□□□ -1.51
HTTP42858 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.6□□□□□ -1.51
HTTP42858 AL353729.2-201ENST00000605859 1249 ntBASIC5.6□□□□□ -1.51
HTTP42858 AC090948.2-201ENST00000607363 564 ntBASIC5.6□□□□□ -1.51
HTTP42858 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.6□□□□□ -1.51
HTTP42858 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.6□□□□□ -1.51
HTTP42858 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HTTP42858 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.6□□□□□ -1.51
HTTP42858 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.6□□□□□ -1.51
HTTP42858 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.6□□□□□ -1.51
HTTP42858 MIR3939-201ENST00000582614 106 ntBASIC5.6□□□□□ -1.51
HTTP42858 AC114781.5-201ENST00000615297 108 ntBASIC5.6□□□□□ -1.51
HTTP42858 SNX18P1Y-201ENST00000616231 511 ntBASIC5.6□□□□□ -1.51
HTTP42858 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.6□□□□□ -1.51
HTTP42858 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC5.6□□□□□ -1.51
HTTP42858 FBXL20-201ENST00000264658 10388 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HTTP42858 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
HTTP42858 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HTTP42858 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
HTTP42858 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
HTTP42858 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
HTTP42858 HYALP1-201ENST00000417674 1279 ntBASIC5.59□□□□□ -1.51
HTTP42858 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.59□□□□□ -1.51
HTTP42858 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.59□□□□□ -1.51
HTTP42858 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.59□□□□□ -1.51
HTTP42858 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.59□□□□□ -1.51
HTTP42858 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.59□□□□□ -1.51
HTTP42858 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC5.59□□□□□ -1.51
HTTP42858 SNORA67.7-201ENST00000516664 135 ntBASIC5.59□□□□□ -1.51
HTTP42858 IGKV2-23-201ENST00000518729 323 ntBASIC5.59□□□□□ -1.51
HTTP42858 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.59□□□□□ -1.51
HTTP42858 SMG1P7-201ENST00000565246 2704 ntBASIC5.59□□□□□ -1.51
HTTP42858 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HTTP42858 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HTTP42858 EP400NL-208ENST00000475841 7090 ntTSL 2 BASIC5.59□□□□□ -1.51
HTTP42858 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HTTP42858 TAF8-201ENST00000372977 6680 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
HTTP42858 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HTTP42858 SPTAN1-202ENST00000372731 7889 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
HTTP42858 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
HTTP42858 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HTTP42858 RNA5SP251-201ENST00000410614 137 ntBASIC5.59□□□□□ -1.51
HTTP42858 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.59□□□□□ -1.51
HTTP42858 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.59□□□□□ -1.51
HTTP42858 AC019322.1-201ENST00000571869 389 ntBASIC5.59□□□□□ -1.51
HTTP42858 ZYXP1-201ENST00000617638 118 ntBASIC5.59□□□□□ -1.51
HTTP42858 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
HTTP42858 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.59□□□□□ -1.51
HTTP42858 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
HTTP42858 IGFN1-202ENST00000335211 11810 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
HTTP42858 CHIC1-202ENST00000373504 6797 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HTTP42858 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
HTTP42858 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC5.59□□□□□ -1.52
HTTP42858 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
HTTP42858 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.52
HTTP42858 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.59□□□□□ -1.52
HTTP42858 FABP7P1-201ENST00000424004 391 ntBASIC5.59□□□□□ -1.52
HTTP42858 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.59□□□□□ -1.52
HTTP42858 REG1CP-206ENST00000447469 496 ntBASIC5.59□□□□□ -1.52
HTTP42858 RN7SL814P-201ENST00000487715 300 ntBASIC5.59□□□□□ -1.52
HTTP42858 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.59□□□□□ -1.52
HTTP42858 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.59□□□□□ -1.52
HTTP42858 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
HTTP42858 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.59□□□□□ -1.52
HTTP42858 AC002044.3-201ENST00000623314 541 ntBASIC5.59□□□□□ -1.52
HTTP42858 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.59□□□□□ -1.52
HTTP42858 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
HTTP42858 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
HTTP42858 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
HTTP42858 AC140479.2-201ENST00000421567 3130 ntBASIC5.58□□□□□ -1.52
HTTP42858 WDR36-203ENST00000506538 7048 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HTTP42858 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
HTTP42858 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC5.58□□□□□ -1.52
HTTP42858 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HTTP42858 RAD17P2-201ENST00000451754 1977 ntBASIC5.58□□□□□ -1.52
HTTP42858 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms