Protein–RNA interactions for Protein: P09016

HOXD4, Homeobox protein Hox-D4, humanhuman

Predicted RBP Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4P09016 BNIP3P41-202ENST00000616656 861 ntBASIC5.16□□□□□ -1.58
HOXD4P09016 AC004808.2-201ENST00000627965 773 ntBASIC5.16□□□□□ -1.58
HOXD4P09016 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.16□□□□□ -1.58
HOXD4P09016 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
HOXD4P09016 AL138820.1-201ENST00000617901 5305 ntBASIC5.16□□□□□ -1.58
HOXD4P09016 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXD4P09016 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.16□□□□□ -1.58
HOXD4P09016 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
HOXD4P09016 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HOXD4P09016 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HOXD4P09016 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.16□□□□□ -1.58
HOXD4P09016 AL121839.2-201ENST00000565058 6943 ntBASIC5.16□□□□□ -1.58
HOXD4P09016 YES1P1-201ENST00000418510 1628 ntBASIC5.15□□□□□ -1.58
HOXD4P09016 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
HOXD4P09016 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
HOXD4P09016 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
HOXD4P09016 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
HOXD4P09016 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.15□□□□□ -1.58
HOXD4P09016 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.15□□□□□ -1.58
HOXD4P09016 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HOXD4P09016 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.15□□□□□ -1.58
HOXD4P09016 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
HOXD4P09016 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HOXD4P09016 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
HOXD4P09016 RN7SKP74-201ENST00000362849 309 ntBASIC5.15□□□□□ -1.59
HOXD4P09016 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
HOXD4P09016 AC240504.1-201ENST00000395709 845 ntBASIC5.15□□□□□ -1.59
HOXD4P09016 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.15□□□□□ -1.59
HOXD4P09016 AC073410.1-201ENST00000435125 589 ntBASIC5.15□□□□□ -1.59
HOXD4P09016 RPS3AP38-201ENST00000435889 763 ntBASIC5.15□□□□□ -1.59
HOXD4P09016 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
HOXD4P09016 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.15□□□□□ -1.59
HOXD4P09016 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.15□□□□□ -1.59
HOXD4P09016 RPS23P6-201ENST00000466136 431 ntBASIC5.15□□□□□ -1.59
HOXD4P09016 RPL32P9-201ENST00000487963 407 ntBASIC5.15□□□□□ -1.59
HOXD4P09016 RN7SL184P-201ENST00000488308 297 ntBASIC5.15□□□□□ -1.59
HOXD4P09016 AC009120.1-201ENST00000493458 473 ntBASIC5.15□□□□□ -1.59
HOXD4P09016 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC5.15□□□□□ -1.59
HOXD4P09016 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.15□□□□□ -1.59
HOXD4P09016 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.15□□□□□ -1.59
HOXD4P09016 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.15□□□□□ -1.59
HOXD4P09016 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.15□□□□□ -1.59
HOXD4P09016 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.15□□□□□ -1.59
HOXD4P09016 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.15□□□□□ -1.59
HOXD4P09016 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.15□□□□□ -1.59
HOXD4P09016 MIR132-201ENST00000591554 101 ntBASIC5.15□□□□□ -1.59
HOXD4P09016 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.15□□□□□ -1.59
HOXD4P09016 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.15□□□□□ -1.59
HOXD4P09016 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.15□□□□□ -1.59
HOXD4P09016 AC063977.5-201ENST00000601044 974 ntBASIC5.15□□□□□ -1.59
HOXD4P09016 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.15□□□□□ -1.59
HOXD4P09016 AC037198.3-201ENST00000616754 526 ntBASIC5.15□□□□□ -1.59
HOXD4P09016 AC021766.1-201ENST00000624404 741 ntBASIC5.15□□□□□ -1.59
HOXD4P09016 MAPK10-350ENST00000641777 965 ntBASIC5.15□□□□□ -1.59
HOXD4P09016 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
HOXD4P09016 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HOXD4P09016 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.15□□□□□ -1.59
HOXD4P09016 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.15□□□□□ -1.59
HOXD4P09016 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HOXD4P09016 CR383656.5-201ENST00000547616 1340 ntBASIC5.15□□□□□ -1.59
HOXD4P09016 AP005432.1-201ENST00000580891 3485 ntBASIC5.15□□□□□ -1.59
HOXD4P09016 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.15□□□□□ -1.59
HOXD4P09016 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.15□□□□□ -1.59
HOXD4P09016 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
HOXD4P09016 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.15□□□□□ -1.59
HOXD4P09016 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HOXD4P09016 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HOXD4P09016 AC073429.2-201ENST00000569694 1444 ntBASIC5.14□□□□□ -1.59
HOXD4P09016 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.14□□□□□ -1.59
HOXD4P09016 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HOXD4P09016 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
HOXD4P09016 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HOXD4P09016 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.14□□□□□ -1.59
HOXD4P09016 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HOXD4P09016 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.14□□□□□ -1.59
HOXD4P09016 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
HOXD4P09016 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
HOXD4P09016 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HOXD4P09016 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.14□□□□□ -1.59
HOXD4P09016 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXD4P09016 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.14□□□□□ -1.59
HOXD4P09016 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.14□□□□□ -1.59
HOXD4P09016 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXD4P09016 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HOXD4P09016 NANOGP4-201ENST00000427230 913 ntBASIC5.14□□□□□ -1.59
HOXD4P09016 CFL1P1-202ENST00000432948 411 ntBASIC5.14□□□□□ -1.59
HOXD4P09016 UBE2V2P3-201ENST00000433562 437 ntBASIC5.14□□□□□ -1.59
HOXD4P09016 GAPDHP58-201ENST00000438477 1006 ntBASIC5.14□□□□□ -1.59
HOXD4P09016 RPS12P17-201ENST00000438591 377 ntBASIC5.14□□□□□ -1.59
HOXD4P09016 AC015983.1-201ENST00000441577 373 ntBASIC5.14□□□□□ -1.59
HOXD4P09016 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
HOXD4P09016 AL606490.1-201ENST00000452266 765 ntBASIC5.14□□□□□ -1.59
HOXD4P09016 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC5.14□□□□□ -1.59
HOXD4P09016 OR2AO1P-201ENST00000476497 403 ntBASIC5.14□□□□□ -1.59
HOXD4P09016 AC079080.1-201ENST00000479841 822 ntBASIC5.14□□□□□ -1.59
HOXD4P09016 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.14□□□□□ -1.59
HOXD4P09016 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.14□□□□□ -1.59
HOXD4P09016 RPS26P24-201ENST00000497656 331 ntBASIC5.14□□□□□ -1.59
HOXD4P09016 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HOXD4P09016 MRPS16P1-201ENST00000523462 412 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms