Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 FKBP1AP1-201ENST00000594588 318 ntBASIC5.39□□□□□ -1.55
HLA-DQB2P05538 AC005252.1-201ENST00000604518 1063 ntBASIC5.39□□□□□ -1.55
HLA-DQB2P05538 AC109309.2-201ENST00000612597 332 ntBASIC5.39□□□□□ -1.55
HLA-DQB2P05538 MIR4302-201ENST00000638058 60 ntBASIC5.39□□□□□ -1.55
HLA-DQB2P05538 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
HLA-DQB2P05538 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DQB2P05538 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DQB2P05538 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DQB2P05538 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.39□□□□□ -1.55
HLA-DQB2P05538 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
HLA-DQB2P05538 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.39□□□□□ -1.55
HLA-DQB2P05538 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
HLA-DQB2P05538 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
HLA-DQB2P05538 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-DQB2P05538 GVINP1-202ENST00000531871 7271 ntBASIC5.38□□□□□ -1.55
HLA-DQB2P05538 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.38□□□□□ -1.55
HLA-DQB2P05538 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-DQB2P05538 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.38□□□□□ -1.55
HLA-DQB2P05538 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-DQB2P05538 RNA5SP183-201ENST00000362452 119 ntBASIC5.38□□□□□ -1.55
HLA-DQB2P05538 RN7SKP162-201ENST00000363605 345 ntBASIC5.38□□□□□ -1.55
HLA-DQB2P05538 OR1L6-202ENST00000373684 1044 ntBASIC5.38□□□□□ -1.55
HLA-DQB2P05538 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.38□□□□□ -1.55
HLA-DQB2P05538 NPM1P4-201ENST00000414095 812 ntBASIC5.38□□□□□ -1.55
HLA-DQB2P05538 AC079355.1-201ENST00000421770 223 ntBASIC5.38□□□□□ -1.55
HLA-DQB2P05538 FAM96AP1-201ENST00000430879 482 ntBASIC5.38□□□□□ -1.55
HLA-DQB2P05538 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC5.38□□□□□ -1.55
HLA-DQB2P05538 PPIAP20-201ENST00000449839 135 ntBASIC5.38□□□□□ -1.55
HLA-DQB2P05538 AC079168.1-201ENST00000458741 345 ntBASIC5.38□□□□□ -1.55
HLA-DQB2P05538 RPL7P6-201ENST00000480903 738 ntBASIC5.38□□□□□ -1.55
HLA-DQB2P05538 RN7SL814P-201ENST00000487715 300 ntBASIC5.38□□□□□ -1.55
HLA-DQB2P05538 RPS24P16-201ENST00000497294 392 ntBASIC5.38□□□□□ -1.55
HLA-DQB2P05538 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.38□□□□□ -1.55
HLA-DQB2P05538 IGKV2-18-201ENST00000522607 343 ntBASIC5.38□□□□□ -1.55
HLA-DQB2P05538 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.38□□□□□ -1.55
HLA-DQB2P05538 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.38□□□□□ -1.55
HLA-DQB2P05538 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-DQB2P05538 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.38□□□□□ -1.55
HLA-DQB2P05538 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.38□□□□□ -1.55
HLA-DQB2P05538 AL121839.2-201ENST00000565058 6943 ntBASIC5.38□□□□□ -1.55
HLA-DQB2P05538 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
HLA-DQB2P05538 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-DQB2P05538 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.38□□□□□ -1.55
HLA-DQB2P05538 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-DQB2P05538 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-DQB2P05538 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.38□□□□□ -1.55
HLA-DQB2P05538 AP000432.2-201ENST00000624164 2048 ntBASIC5.38□□□□□ -1.55
HLA-DQB2P05538 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.37□□□□□ -1.55
HLA-DQB2P05538 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DQB2P05538 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
HLA-DQB2P05538 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DQB2P05538 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DQB2P05538 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DQB2P05538 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DQB2P05538 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.37□□□□□ -1.55
HLA-DQB2P05538 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DQB2P05538 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.37□□□□□ -1.55
HLA-DQB2P05538 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.37□□□□□ -1.55
HLA-DQB2P05538 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.37□□□□□ -1.55
HLA-DQB2P05538 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DQB2P05538 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
HLA-DQB2P05538 HSPD1P12-201ENST00000429127 1069 ntBASIC5.37□□□□□ -1.55
HLA-DQB2P05538 SETP4-201ENST00000455717 868 ntBASIC5.37□□□□□ -1.55
HLA-DQB2P05538 AC108161.1-201ENST00000461060 402 ntBASIC5.37□□□□□ -1.55
HLA-DQB2P05538 RPS4XP1-201ENST00000482189 787 ntBASIC5.37□□□□□ -1.55
HLA-DQB2P05538 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DQB2P05538 RPL7L1P4-201ENST00000513004 707 ntBASIC5.37□□□□□ -1.55
HLA-DQB2P05538 ATP5LP3-201ENST00000514223 304 ntBASIC5.37□□□□□ -1.55
HLA-DQB2P05538 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.37□□□□□ -1.55
HLA-DQB2P05538 AC022360.1-201ENST00000521058 340 ntBASIC5.37□□□□□ -1.55
HLA-DQB2P05538 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.37□□□□□ -1.55
HLA-DQB2P05538 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.37□□□□□ -1.55
HLA-DQB2P05538 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.37□□□□□ -1.55
HLA-DQB2P05538 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
HLA-DQB2P05538 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.37□□□□□ -1.55
HLA-DQB2P05538 IMMP1LP3-201ENST00000604197 224 ntBASIC5.37□□□□□ -1.55
HLA-DQB2P05538 AL162431.4-201ENST00000604674 411 ntBASIC5.37□□□□□ -1.55
HLA-DQB2P05538 AC011626.1-201ENST00000604710 562 ntBASIC5.37□□□□□ -1.55
HLA-DQB2P05538 WBP1LP8-201ENST00000617401 327 ntBASIC5.37□□□□□ -1.55
HLA-DQB2P05538 AC026367.3-201ENST00000619032 590 ntBASIC5.37□□□□□ -1.55
HLA-DQB2P05538 MIR6839-201ENST00000620425 113 ntBASIC5.37□□□□□ -1.55
HLA-DQB2P05538 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.37□□□□□ -1.55
HLA-DQB2P05538 CASC19-264ENST00000641912 1184 ntBASIC5.37□□□□□ -1.55
HLA-DQB2P05538 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
HLA-DQB2P05538 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DQB2P05538 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
HLA-DQB2P05538 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
HLA-DQB2P05538 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.37□□□□□ -1.55
HLA-DQB2P05538 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DQB2P05538 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-DQB2P05538 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HLA-DQB2P05538 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.36□□□□□ -1.55
HLA-DQB2P05538 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.36□□□□□ -1.55
HLA-DQB2P05538 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
HLA-DQB2P05538 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-DQB2P05538 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-DQB2P05538 AL034549.2-201ENST00000618285 3373 ntBASIC5.36□□□□□ -1.55
HLA-DQB2P05538 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.36□□□□□ -1.55
HLA-DQB2P05538 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.36□□□□□ -1.55
HLA-DQB2P05538 U3.2-201ENST00000362981 210 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 149.4 ms