Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
C4orf47A7E2U8 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.66□□□□□ -1.5
C4orf47A7E2U8 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
C4orf47A7E2U8 DDX18P6-201ENST00000450119 1997 ntBASIC5.66□□□□□ -1.5
C4orf47A7E2U8 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
C4orf47A7E2U8 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
C4orf47A7E2U8 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.65□□□□□ -1.5
C4orf47A7E2U8 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.65□□□□□ -1.5
C4orf47A7E2U8 AL121768.1-201ENST00000613917 2544 ntBASIC5.65□□□□□ -1.5
C4orf47A7E2U8 SNORD8-201ENST00000363915 110 ntBASIC5.65□□□□□ -1.5
C4orf47A7E2U8 RNA5SP131-201ENST00000365452 119 ntBASIC5.65□□□□□ -1.5
C4orf47A7E2U8 OR2W4P-201ENST00000406496 926 ntBASIC5.65□□□□□ -1.5
C4orf47A7E2U8 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.65□□□□□ -1.5
C4orf47A7E2U8 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.65□□□□□ -1.5
C4orf47A7E2U8 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC5.65□□□□□ -1.5
C4orf47A7E2U8 AC005033.1-201ENST00000428904 813 ntBASIC5.65□□□□□ -1.5
C4orf47A7E2U8 MTND4P15-201ENST00000437913 1033 ntBASIC5.65□□□□□ -1.5
C4orf47A7E2U8 AC245047.2-201ENST00000441060 530 ntBASIC5.65□□□□□ -1.5
C4orf47A7E2U8 CUBNP2-201ENST00000443534 1139 ntBASIC5.65□□□□□ -1.5
C4orf47A7E2U8 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.65□□□□□ -1.5
C4orf47A7E2U8 AP002371.1-201ENST00000463604 433 ntBASIC5.65□□□□□ -1.5
C4orf47A7E2U8 RN7SL352P-201ENST00000466002 277 ntBASIC5.65□□□□□ -1.5
C4orf47A7E2U8 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.65□□□□□ -1.5
C4orf47A7E2U8 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.65□□□□□ -1.5
C4orf47A7E2U8 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC5.65□□□□□ -1.5
C4orf47A7E2U8 AC026407.1-201ENST00000518369 204 ntBASIC5.65□□□□□ -1.5
C4orf47A7E2U8 OR6M2P-201ENST00000529831 871 ntBASIC5.65□□□□□ -1.5
C4orf47A7E2U8 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.65□□□□□ -1.5
C4orf47A7E2U8 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC5.65□□□□□ -1.5
C4orf47A7E2U8 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.65□□□□□ -1.5
C4orf47A7E2U8 MRPS21P7-201ENST00000566937 238 ntBASIC5.65□□□□□ -1.5
C4orf47A7E2U8 OR1F2P-201ENST00000570470 933 ntBASIC5.65□□□□□ -1.5
C4orf47A7E2U8 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.65□□□□□ -1.5
C4orf47A7E2U8 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.65□□□□□ -1.5
C4orf47A7E2U8 AC242628.1-201ENST00000606810 391 ntBASIC5.65□□□□□ -1.5
C4orf47A7E2U8 AC104307.1-201ENST00000616142 196 ntBASIC5.65□□□□□ -1.5
C4orf47A7E2U8 AL731566.2-201ENST00000618971 317 ntBASIC5.65□□□□□ -1.5
C4orf47A7E2U8 AC006249.1-201ENST00000621223 471 ntBASIC5.65□□□□□ -1.5
C4orf47A7E2U8 AC132068.1-201ENST00000623805 459 ntBASIC5.65□□□□□ -1.5
C4orf47A7E2U8 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
C4orf47A7E2U8 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
C4orf47A7E2U8 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.65□□□□□ -1.51
C4orf47A7E2U8 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
C4orf47A7E2U8 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
C4orf47A7E2U8 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.65□□□□□ -1.51
C4orf47A7E2U8 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
C4orf47A7E2U8 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
C4orf47A7E2U8 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.65□□□□□ -1.51
C4orf47A7E2U8 TTC41P-205ENST00000551270 3963 ntBASIC5.65□□□□□ -1.51
C4orf47A7E2U8 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
C4orf47A7E2U8 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
C4orf47A7E2U8 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
C4orf47A7E2U8 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
C4orf47A7E2U8 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.65□□□□□ -1.51
C4orf47A7E2U8 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
C4orf47A7E2U8 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
C4orf47A7E2U8 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
C4orf47A7E2U8 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
C4orf47A7E2U8 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.64□□□□□ -1.51
C4orf47A7E2U8 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
C4orf47A7E2U8 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
C4orf47A7E2U8 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
C4orf47A7E2U8 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
C4orf47A7E2U8 RNA5SP183-201ENST00000362452 119 ntBASIC5.64□□□□□ -1.51
C4orf47A7E2U8 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
C4orf47A7E2U8 RNU6-891P-201ENST00000384280 111 ntBASIC5.64□□□□□ -1.51
C4orf47A7E2U8 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
C4orf47A7E2U8 GAPDHP42-201ENST00000406848 981 ntBASIC5.64□□□□□ -1.51
C4orf47A7E2U8 RN7SKP166-201ENST00000410812 305 ntBASIC5.64□□□□□ -1.51
C4orf47A7E2U8 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.64□□□□□ -1.51
C4orf47A7E2U8 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC5.64□□□□□ -1.51
C4orf47A7E2U8 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.64□□□□□ -1.51
C4orf47A7E2U8 OR52B5P-201ENST00000435337 951 ntBASIC5.64□□□□□ -1.51
C4orf47A7E2U8 AL590762.3-201ENST00000436372 640 ntBASIC5.64□□□□□ -1.51
C4orf47A7E2U8 PSMD10P3-201ENST00000437000 448 ntBASIC5.64□□□□□ -1.51
C4orf47A7E2U8 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC5.64□□□□□ -1.51
C4orf47A7E2U8 AC006466.1-201ENST00000438721 289 ntBASIC5.64□□□□□ -1.51
C4orf47A7E2U8 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC5.64□□□□□ -1.51
C4orf47A7E2U8 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
C4orf47A7E2U8 RAB28P2-201ENST00000454299 641 ntBASIC5.64□□□□□ -1.51
C4orf47A7E2U8 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.64□□□□□ -1.51
C4orf47A7E2U8 OR2A3P-201ENST00000493774 953 ntBASIC5.64□□□□□ -1.51
C4orf47A7E2U8 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.64□□□□□ -1.51
C4orf47A7E2U8 AC093534.1-201ENST00000504977 132 ntBASIC5.64□□□□□ -1.51
C4orf47A7E2U8 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.64□□□□□ -1.51
C4orf47A7E2U8 AC119751.4-201ENST00000507498 357 ntBASIC5.64□□□□□ -1.51
C4orf47A7E2U8 OR4R2P-201ENST00000530815 597 ntBASIC5.64□□□□□ -1.51
C4orf47A7E2U8 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.64□□□□□ -1.51
C4orf47A7E2U8 AL049874.4-201ENST00000557593 255 ntBASIC5.64□□□□□ -1.51
C4orf47A7E2U8 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.64□□□□□ -1.51
C4orf47A7E2U8 AC098483.2-201ENST00000603158 454 ntBASIC5.64□□□□□ -1.51
C4orf47A7E2U8 AL021368.3-201ENST00000607119 578 ntBASIC5.64□□□□□ -1.51
C4orf47A7E2U8 AC097478.2-201ENST00000610572 514 ntBASIC5.64□□□□□ -1.51
C4orf47A7E2U8 AC022960.3-201ENST00000619794 441 ntBASIC5.64□□□□□ -1.51
C4orf47A7E2U8 AC004777.1-201ENST00000624317 287 ntBASIC5.64□□□□□ -1.51
C4orf47A7E2U8 AC008993.2-201ENST00000631744 806 ntBASIC5.64□□□□□ -1.51
C4orf47A7E2U8 AC003992.1-201ENST00000635364 557 ntBASIC5.64□□□□□ -1.51
C4orf47A7E2U8 OR52B5P-202ENST00000641118 1110 ntBASIC5.64□□□□□ -1.51
C4orf47A7E2U8 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
C4orf47A7E2U8 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms