Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 AC111193.1-201ENST00000504097 155 ntBASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 RNA5SP434-201ENST00000516647 121 ntBASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 AC011611.5-201ENST00000552477 578 ntBASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 AC084759.1-201ENST00000561168 290 ntBASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 AC007494.1-201ENST00000562293 760 ntBASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 AC018558.5-201ENST00000565840 952 ntBASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 AC023825.1-201ENST00000566704 1030 ntBASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 MIR548Y-201ENST00000582739 110 ntBASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 AC020916.2-201ENST00000591242 360 ntBASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 UBA2-208ENST00000592791 910 ntTSL 2 BASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 AC068768.2-201ENST00000602352 343 ntBASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 MIR6861-201ENST00000618657 64 ntBASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 AP003497.2-201ENST00000624220 967 ntBASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 AP003485.1-201ENST00000625093 753 ntBASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.83□□□□□ -1.32
COL4A3BPQ9Y5P4 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 AL627171.1-201ENST00000618845 1308 ntBASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 ARF4P4-201ENST00000439608 520 ntBASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 DNAJA1P5-201ENST00000440278 943 ntBASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 AC012123.2-201ENST00000485809 248 ntBASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 AC114728.1-201ENST00000488289 483 ntBASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 AC069306.1-201ENST00000507006 843 ntBASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 HMGB1P42-201ENST00000532126 553 ntBASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 AL138895.2-201ENST00000603019 178 ntBASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 AC141002.1-201ENST00000607025 279 ntBASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 AL136097.3-201ENST00000611097 505 ntBASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 AC092724.1-201ENST00000624623 3397 ntBASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 GTF2H2B-203ENST00000508065 1432 ntBASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 AP005432.1-201ENST00000580891 3485 ntBASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
COL4A3BPQ9Y5P4 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
COL4A3BPQ9Y5P4 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms