Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 AP000654.2-201ENST00000605633 586 ntBASIC9.84□□□□□ -0.83
TRIM35Q9UPQ4 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC9.84□□□□□ -0.83
TRIM35Q9UPQ4 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC9.84□□□□□ -0.83
TRIM35Q9UPQ4 HBG1-202ENST00000632727 369 ntTSL 3 BASIC9.84□□□□□ -0.83
TRIM35Q9UPQ4 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
TRIM35Q9UPQ4 TRPS1-208ENST00000519076 3329 ntTSL 5 BASIC9.84□□□□□ -0.83
TRIM35Q9UPQ4 EIF4G3-201ENST00000264211 5802 ntAPPRIS P3 TSL 5 BASIC9.84□□□□□ -0.83
TRIM35Q9UPQ4 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
TRIM35Q9UPQ4 LRRC8B-206ENST00000640258 8034 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
TRIM35Q9UPQ4 MLIP-201ENST00000274897 1815 ntAPPRIS P3 TSL 2 BASIC9.84□□□□□ -0.83
TRIM35Q9UPQ4 NLRP3-202ENST00000348069 3828 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
TRIM35Q9UPQ4 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
TRIM35Q9UPQ4 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC9.84□□□□□ -0.83
TRIM35Q9UPQ4 TNFRSF19-204ENST00000403372 4277 ntAPPRIS ALT2 TSL 2 BASIC9.84□□□□□ -0.83
TRIM35Q9UPQ4 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC9.84□□□□□ -0.83
TRIM35Q9UPQ4 MAPK10-281ENST00000641170 3070 ntBASIC9.84□□□□□ -0.83
TRIM35Q9UPQ4 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 FGG-201ENST00000336098 1659 ntTSL 2 BASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 AC100810.3-201ENST00000633189 2240 ntBASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 PPP1R12B-204ENST00000391959 15431 ntTSL 5 BASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 LIMCH1-218ENST00000513024 5129 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 LARGE-AS1-203ENST00000438159 2618 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 GTPBP10-202ENST00000257659 1740 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 LINC01692-201ENST00000441009 2719 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 Y_RNA.176-201ENST00000363815 109 ntBASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 RN7SKP36-201ENST00000363997 312 ntBASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 RNU6-74P-201ENST00000384235 107 ntBASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 MORN2-203ENST00000409131 544 ntTSL 5 BASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 DPY19L1P2-201ENST00000426647 915 ntBASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 IFNA20P-201ENST00000436840 528 ntBASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 HCG20-208ENST00000439406 1202 ntTSL 2 BASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 PDPN-205ENST00000487038 607 ntTSL 2 BASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 AC095059.2-201ENST00000510601 933 ntBASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 SMURF2P1-201ENST00000514992 481 ntBASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 RN7SKP256-201ENST00000517201 314 ntBASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 AC104986.1-201ENST00000517978 436 ntBASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 RN7SL178P-201ENST00000582930 304 ntBASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 AC104785.1-201ENST00000603220 588 ntBASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 AC112191.3-201ENST00000604371 277 ntBASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 AL356585.4-201ENST00000623078 1229 ntBASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 AC087893.2-201ENST00000623272 255 ntBASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 AC093591.3-201ENST00000634516 308 ntBASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 CKAP2P1-201ENST00000555477 2049 ntBASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 AL161891.1-201ENST00000621575 4636 ntBASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 STAMBP-202ENST00000394070 6691 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 PSG5-202ENST00000366175 1766 ntTSL 5 BASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 CXCR2P1-201ENST00000439871 2503 ntTSL 3 BASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 AC107398.3-201ENST00000562284 7000 ntBASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 LINC01814-202ENST00000454224 8839 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
TRIM35Q9UPQ4 RHOJ-201ENST00000316754 3302 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
TRIM35Q9UPQ4 CYP1D1P-201ENST00000416662 1433 ntBASIC9.82□□□□□ -0.84
TRIM35Q9UPQ4 INTS7-202ENST00000366993 3422 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
TRIM35Q9UPQ4 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC9.82□□□□□ -0.84
TRIM35Q9UPQ4 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
TRIM35Q9UPQ4 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
TRIM35Q9UPQ4 LINC02159-202ENST00000518580 2323 ntTSL 2 BASIC9.82□□□□□ -0.84
TRIM35Q9UPQ4 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
TRIM35Q9UPQ4 AL080312.1-201ENST00000256654 824 ntBASIC9.82□□□□□ -0.84
TRIM35Q9UPQ4 AL078621.1-201ENST00000272567 768 ntBASIC9.82□□□□□ -0.84
TRIM35Q9UPQ4 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
TRIM35Q9UPQ4 RNA5SP27-201ENST00000363839 119 ntBASIC9.82□□□□□ -0.84
TRIM35Q9UPQ4 RNA5SP260-201ENST00000363849 111 ntBASIC9.82□□□□□ -0.84
TRIM35Q9UPQ4 Y_RNA.197-201ENST00000364004 102 ntBASIC9.82□□□□□ -0.84
TRIM35Q9UPQ4 SCYL3-202ENST00000367771 6364 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
TRIM35Q9UPQ4 RNU6-1297P-201ENST00000384415 104 ntBASIC9.82□□□□□ -0.84
TRIM35Q9UPQ4 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
TRIM35Q9UPQ4 U3.23-201ENST00000391132 200 ntBASIC9.82□□□□□ -0.84
TRIM35Q9UPQ4 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
TRIM35Q9UPQ4 SNX18P13-201ENST00000412442 529 ntBASIC9.82□□□□□ -0.84
TRIM35Q9UPQ4 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC9.82□□□□□ -0.84
TRIM35Q9UPQ4 AC009961.2-201ENST00000435771 251 ntBASIC9.82□□□□□ -0.84
TRIM35Q9UPQ4 AC073415.1-201ENST00000449240 153 ntBASIC9.82□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms