Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
UPF2Q9HAU5 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
UPF2Q9HAU5 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC6.55□□□□□ -1.36
UPF2Q9HAU5 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
UPF2Q9HAU5 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.55□□□□□ -1.36
UPF2Q9HAU5 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
UPF2Q9HAU5 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
UPF2Q9HAU5 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
UPF2Q9HAU5 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
UPF2Q9HAU5 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
UPF2Q9HAU5 METTL5-202ENST00000308099 629 ntTSL 3 BASIC6.55□□□□□ -1.36
UPF2Q9HAU5 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
UPF2Q9HAU5 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
UPF2Q9HAU5 OR7E101P-201ENST00000400428 513 ntBASIC6.55□□□□□ -1.36
UPF2Q9HAU5 DBIP1-201ENST00000401435 260 ntBASIC6.55□□□□□ -1.36
UPF2Q9HAU5 CTSL3P-202ENST00000412179 788 ntBASIC6.55□□□□□ -1.36
UPF2Q9HAU5 MTATP6P19-201ENST00000413797 659 ntBASIC6.55□□□□□ -1.36
UPF2Q9HAU5 AC007738.1-201ENST00000413892 348 ntBASIC6.55□□□□□ -1.36
UPF2Q9HAU5 AL035660.1-201ENST00000422041 222 ntBASIC6.55□□□□□ -1.36
UPF2Q9HAU5 AC113412.1-201ENST00000425840 504 ntBASIC6.55□□□□□ -1.36
UPF2Q9HAU5 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
UPF2Q9HAU5 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.55□□□□□ -1.36
UPF2Q9HAU5 ACA64.1-201ENST00000459171 127 ntBASIC6.55□□□□□ -1.36
UPF2Q9HAU5 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.55□□□□□ -1.36
UPF2Q9HAU5 AC021006.1-201ENST00000489849 553 ntBASIC6.55□□□□□ -1.36
UPF2Q9HAU5 RPL15P21-201ENST00000495592 567 ntBASIC6.55□□□□□ -1.36
UPF2Q9HAU5 LSM3P4-201ENST00000502948 309 ntBASIC6.55□□□□□ -1.36
UPF2Q9HAU5 AC018797.1-201ENST00000510791 255 ntBASIC6.55□□□□□ -1.36
UPF2Q9HAU5 Y_RNA.667-201ENST00000516212 107 ntBASIC6.55□□□□□ -1.36
UPF2Q9HAU5 RNA5SP438-201ENST00000516561 112 ntBASIC6.55□□□□□ -1.36
UPF2Q9HAU5 SNORA70.20-201ENST00000516848 126 ntBASIC6.55□□□□□ -1.36
UPF2Q9HAU5 AC002310.3-201ENST00000569728 723 ntBASIC6.55□□□□□ -1.36
UPF2Q9HAU5 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.55□□□□□ -1.36
UPF2Q9HAU5 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC6.55□□□□□ -1.36
UPF2Q9HAU5 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
UPF2Q9HAU5 LYARP1-201ENST00000436977 1501 ntBASIC6.55□□□□□ -1.36
UPF2Q9HAU5 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
UPF2Q9HAU5 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC6.55□□□□□ -1.36
UPF2Q9HAU5 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.54□□□□□ -1.36
UPF2Q9HAU5 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
UPF2Q9HAU5 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
UPF2Q9HAU5 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
UPF2Q9HAU5 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
UPF2Q9HAU5 TMSB4XP2-201ENST00000335179 210 ntBASIC6.54□□□□□ -1.36
UPF2Q9HAU5 RNA5SP131-201ENST00000365452 119 ntBASIC6.54□□□□□ -1.36
UPF2Q9HAU5 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.54□□□□□ -1.36
UPF2Q9HAU5 MIR1203-201ENST00000408812 85 ntBASIC6.54□□□□□ -1.36
UPF2Q9HAU5 AC211486.3-201ENST00000412694 621 ntBASIC6.54□□□□□ -1.36
UPF2Q9HAU5 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.54□□□□□ -1.36
UPF2Q9HAU5 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.54□□□□□ -1.36
UPF2Q9HAU5 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.54□□□□□ -1.36
UPF2Q9HAU5 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
UPF2Q9HAU5 NPM1P19-201ENST00000450070 712 ntBASIC6.54□□□□□ -1.36
UPF2Q9HAU5 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.54□□□□□ -1.36
UPF2Q9HAU5 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.54□□□□□ -1.36
UPF2Q9HAU5 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.54□□□□□ -1.36
UPF2Q9HAU5 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.54□□□□□ -1.36
UPF2Q9HAU5 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.54□□□□□ -1.36
UPF2Q9HAU5 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.54□□□□□ -1.36
UPF2Q9HAU5 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.54□□□□□ -1.36
UPF2Q9HAU5 AC079905.1-201ENST00000549280 475 ntBASIC6.54□□□□□ -1.36
UPF2Q9HAU5 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC6.54□□□□□ -1.36
UPF2Q9HAU5 MIR4472-2-201ENST00000582069 67 ntBASIC6.54□□□□□ -1.36
UPF2Q9HAU5 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
UPF2Q9HAU5 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC6.54□□□□□ -1.36
UPF2Q9HAU5 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.54□□□□□ -1.36
UPF2Q9HAU5 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
UPF2Q9HAU5 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
UPF2Q9HAU5 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
UPF2Q9HAU5 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC6.54□□□□□ -1.36
UPF2Q9HAU5 NEPNP-201ENST00000404786 1371 ntBASIC6.54□□□□□ -1.36
UPF2Q9HAU5 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
UPF2Q9HAU5 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
UPF2Q9HAU5 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
UPF2Q9HAU5 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
UPF2Q9HAU5 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
UPF2Q9HAU5 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC6.53□□□□□ -1.36
UPF2Q9HAU5 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC6.53□□□□□ -1.36
UPF2Q9HAU5 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
UPF2Q9HAU5 LINC01963-201ENST00000562038 3148 ntBASIC6.53□□□□□ -1.36
UPF2Q9HAU5 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
UPF2Q9HAU5 IFIT1P1-201ENST00000400497 1449 ntBASIC6.53□□□□□ -1.36
UPF2Q9HAU5 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
UPF2Q9HAU5 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
UPF2Q9HAU5 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
UPF2Q9HAU5 RNA5SP273-201ENST00000362484 113 ntBASIC6.53□□□□□ -1.36
UPF2Q9HAU5 RNU1-150P-201ENST00000362491 162 ntBASIC6.53□□□□□ -1.36
UPF2Q9HAU5 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.53□□□□□ -1.36
UPF2Q9HAU5 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.53□□□□□ -1.36
UPF2Q9HAU5 AC104333.2-201ENST00000422630 192 ntBASIC6.53□□□□□ -1.36
UPF2Q9HAU5 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
UPF2Q9HAU5 BX323845.3-201ENST00000428215 527 ntBASIC6.53□□□□□ -1.36
UPF2Q9HAU5 AC046176.1-201ENST00000435260 1170 ntBASIC6.53□□□□□ -1.36
UPF2Q9HAU5 OR6D1P-201ENST00000436165 939 ntBASIC6.53□□□□□ -1.36
UPF2Q9HAU5 GAPDHP58-201ENST00000438477 1006 ntBASIC6.53□□□□□ -1.36
UPF2Q9HAU5 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.53□□□□□ -1.36
UPF2Q9HAU5 GTF3AP5-201ENST00000442645 697 ntBASIC6.53□□□□□ -1.36
UPF2Q9HAU5 VDAC2P4-201ENST00000452925 711 ntBASIC6.53□□□□□ -1.36
UPF2Q9HAU5 OR5H7P-201ENST00000514084 930 ntBASIC6.53□□□□□ -1.36
UPF2Q9HAU5 HSD3BP3-201ENST00000514706 994 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms