Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 CTDSPL-201ENST00000273179 4459 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 ARMC3-202ENST00000376528 3258 ntTSL 2 BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 LHX9-203ENST00000367390 7413 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 DYNLRB1-201ENST00000300469 1464 ntTSL 5 BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 PTPRB-201ENST00000261266 6110 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 AC098657.2-201ENST00000567886 1976 ntBASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 AC106712.1-201ENST00000483840 1888 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 SAMMSON-210ENST00000641260 1308 ntBASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 AOAH-210ENST00000617267 2398 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 PTAFR-202ENST00000373857 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 XIRP2-206ENST00000409728 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 Y_RNA.152-201ENST00000363578 100 ntBASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 RN7SKP47-201ENST00000365347 328 ntBASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 MIR146B-201ENST00000365699 73 ntBASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 ZDHHC11B-201ENST00000382776 1116 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 Y_RNA.515-201ENST00000384535 112 ntBASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 RPL7-203ENST00000396466 762 ntTSL 3 BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 AL024509.1-201ENST00000397093 927 ntBASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 MORF4L1P1-201ENST00000404582 967 ntBASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 AL513302.1-201ENST00000415679 428 ntBASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 PIGX-204ENST00000421265 677 ntTSL 2 BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 AL157402.1-201ENST00000429469 363 ntTSL 3 BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 RPL14P5-201ENST00000436474 730 ntBASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 LINC01006-205ENST00000440711 336 ntTSL 2 BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 AL365356.2-201ENST00000441526 196 ntBASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 ATP6V1G1P3-201ENST00000442568 280 ntBASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 AL441992.1-201ENST00000443631 544 ntTSL 2 BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 GRM8-206ENST00000444921 1251 ntTSL 3 BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 AC002553.2-201ENST00000453217 340 ntBASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 MTCO3P2-201ENST00000457365 171 ntBASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 WWTR1-IT1-201ENST00000463167 451 ntTSL 5 BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 AL049714.1-201ENST00000466686 347 ntBASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 SYNPR-208ENST00000472899 527 ntTSL 4 BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 AC098583.1-201ENST00000480875 255 ntBASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 AL672142.1-201ENST00000482796 378 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 ACOT9-207ENST00000492081 683 ntTSL 3 BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 RN7SL124P-201ENST00000498656 285 ntBASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 AC092436.1-201ENST00000506450 503 ntBASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 RNU6-408P-201ENST00000515910 100 ntBASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 RNU6-1016P-201ENST00000516689 94 ntBASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 AC124290.2-201ENST00000519431 286 ntBASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 AC011979.2-201ENST00000527568 352 ntBASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 AC104031.1-201ENST00000527726 372 ntTSL 2 BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 AC103843.2-201ENST00000530523 682 ntBASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 AC023511.1-201ENST00000549055 571 ntTSL 3 BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 AC083805.2-201ENST00000549683 610 ntTSL 2 BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 BEST3-210ENST00000551160 721 ntTSL 3 BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 FRG2IP-201ENST00000563581 781 ntBASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 FRG2HP-201ENST00000568807 832 ntBASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 RN7SL615P-201ENST00000584065 298 ntBASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 SNORD39.3-201ENST00000584451 71 ntBASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 AC016590.2-201ENST00000592319 375 ntTSL 3 BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 SMCO4P1-201ENST00000592909 177 ntBASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 AL133351.4-201ENST00000604204 631 ntBASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 AC122710.3-201ENST00000606566 541 ntBASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 AL591167.1-201ENST00000607321 456 ntBASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 AC009237.16-201ENST00000612987 506 ntBASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 uc_338.3-201ENST00000613268 181 ntBASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 AC015574.1-201ENST00000615194 489 ntTSL 5 BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 AL356274.1-201ENST00000617064 410 ntBASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 MIR6760-201ENST00000617342 68 ntBASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 AC010378.1-201ENST00000619270 362 ntBASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 RN7SL650P-201ENST00000619902 299 ntBASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 AC244100.1-202ENST00000621554 382 ntBASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 Z98752.3-201ENST00000621802 566 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 AC239585.2-201ENST00000624269 557 ntTSL 4 BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 SNX18P12-201ENST00000624821 759 ntBASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 MIR6511B2-201ENST00000636908 71 ntBASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 AC097493.5-201ENST00000641103 1010 ntBASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC4.31□□□□□ -1.72
KRTAP3-1Q9BYR8 C9orf131-205ENST00000421362 3259 ntAPPRIS ALT2 TSL 4 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms